DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru3 and celf4

DIOPT Version :9

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_031757481.1 Gene:celf4 / 779831 XenbaseID:XB-GENE-5873699 Length:488 Species:Xenopus tropicalis


Alignment Length:408 Identity:245/408 - (60%)
Similarity:275/408 - (67%) Gaps:56/408 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAF 85
            |||.:|:|||::|||.|  |||||||||:|||:|||||::|..||.||||||||||||.||||||
 Frog   117 MNRPIQVKPADSESRGE--DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAF 179

  Fly    86 VKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSP 150
            ||:.|..|||:||..|||||||||||||||||:|||:|||.:||||||||.|.:.||... ||..
 Frog   180 VKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAI-QFGA 243

  Fly   151 YGAYAQ--QQQQAALMAAAATAPGSAAAYMNPMAALAT---QIPHGLN-------------GTGQ 197
            ||||||  .|||||:||:.|     ...|:|||||.|.   |....||             |...
 Frog   244 YGAYAQALMQQQAAIMASVA-----QGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGST 303

  Fly   198 PPSLPSPTMPNFNMGANTPNGQPG--GAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGL 260
            ||.:.:|.:|:.    .:|.|..|  |..|.|....||:.||.|||       ||.....|....
 Frog   304 PPGITAPAVPSI----PSPIGVNGFTGIPAQANGQPAAEAVFANGI-------HPYPAQSPTAAD 357

  Fly   261 PNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNL 325
            |      ||.|:.|:..:.|.|:||.|||..||.|.|...:...|||           |||||||
 Frog   358 P------LQQAYAGVQQYAGPAYPAAYGQISQAFPQPPPMIPQQQRE-----------GPEGCNL 405

  Fly   326 FIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIG 390
            ||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||
 Frog   406 FIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIG 470

  Fly   391 MKRLKVQLKRPKDASRPY 408
            ||||||||||||||:|||
 Frog   471 MKRLKVQLKRPKDANRPY 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 63/79 (80%)
ELAV_HUD_SF 43..404 CDD:273741 226/380 (59%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 76/77 (99%)
celf4XP_031757481.1 RRM1_CELF3_4_5_6 42..128 CDD:410041 7/10 (70%)
RRM2_CELF3_4_5_6 134..214 CDD:410043 63/79 (80%)
RRM3_CELF3_4_5_6 399..477 CDD:241083 76/77 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4961
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 377 1.000 Inparanoid score I2035
OMA 1 1.010 - - QHG54704
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 1 1.000 - - otm47889
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

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