DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru3 and CELF6

DIOPT Version :10

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_443072.3 Gene:CELF6 / 60677 HGNCID:14059 Length:481 Species:Homo sapiens


Alignment Length:417 Identity:223/417 - (53%)
Similarity:263/417 - (63%) Gaps:80/417 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAF 85
            |||.:|:|||.:|.|.|  |||||||||.|||.|:|||::|.|||.|||||:||.|||.||||||
Human   116 MNRPIQVKPAASEGRGE--DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 178

  Fly    86 VKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSP 150
            ||||||.|||:||..||||:||.|||||||||.|||::||.:|||||||||:...:|      :|
Human   179 VKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGAFHP------AP 237

  Fly   151 Y-----GAY--AQQQQQAALMAAAATAPGSAAAYMNPMAALATQIPHGL---------------- 192
            .     |||  |..|.||||: |||..||     :.|:||:|.|:.|..                
Human   238 LPLGACGAYTTAILQHQAALL-AAAQGPG-----LGPVAAVAAQMQHVAAFSLVAAPLLPAAAAN 296

  Fly   193 ----NGTGQPPSLPSPTMPNFNMGANTP--NGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPL 251
                :|.|..|.||:|...| ..|..||  |||||           :|.::.||:  :.:|..  
Human   297 SPPGSGPGTLPGLPAPIGVN-GFGPLTPQTNGQPG-----------SDTLYNNGL--SPYPAQ-- 345

  Fly   252 HLTIPPQGLPNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCS 316
                     ..|.|..||.|:.|:..: ..|:|:.|.....|.|...:|:...|||         
Human   346 ---------SPGVADPLQQAYAGMHHY-AAAYPSAYAPVSTAFPQQPSALPQQQRE--------- 391

  Fly   317 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 381
              |||||||||||||||||||||:|.|||||.|:|:|||:||||||||||||||||||.|||.||
Human   392 --GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAI 454

  Fly   382 QAMNGFQIGMKRLKVQLKRPKDASRPY 408
            |||||||||||||||||||||||:|||
Human   455 QAMNGFQIGMKRLKVQLKRPKDANRPY 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 62/79 (78%)
ELAV_HUD_SF 43..404 CDD:273741 205/389 (53%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 69/77 (90%)
CELF6NP_443072.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
RRM1_CELF3_4_5_6 41..127 CDD:410041 7/10 (70%)
PABP-1234 <48..390 CDD:130689 139/313 (44%)
RRM2_CELF3_4_5_6 133..213 CDD:410043 62/79 (78%)
RRM3_CELF3_4_5_6 392..470 CDD:241083 69/77 (90%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.