Protein Alignment bru3 and CG4612

DIOPT Version :10

• Sequence 1: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Alignment Length: 323
• Identity: 76/323 - (23%)
• Similarity: 119/323 - (36%)
• Gaps: 71/323 - (21%)

  Fly   141 NPFVFNQFSP-----YGAYAQQQQQAALMAAAA---TAPGSAAAYMNPMAALATQIPHGLNGTGQ 197
            ||..::|..|     ..|.|..|||....||||   :..|...|..|.:||.|....||.|..|.
  Fly    11 NPANYHQQQPALNHHTLAAAHHQQQLHHHAAAAGHLSHVGGGHAASNHLAAAAVLGRHGHNSLGS 75

  Fly   198 PPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNGIPQT------------------ 244
            ..:..|....|..:|.       ||.|.|:.:...:.|   |..|.:
  Fly    76 GHTSTSSHSANVGVGV-------GGGALASGSTGGSGG---NSSPDSGKIYIKNLERSIDNKAVY 130

  Fly   245 ---AFPGHPLHLTIPPQ--------GLPNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPL 298
               :..|:.|:..:...        |..:.|:.....|          |...|.|.........:
  Fly   131 DTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARA----------AIEKVNGMLCNNQKVHV 185

  Fly   299 AAVAP---TQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRAT 360
            ....|   .::|....|.          ||::.:|.:||.:..|.:||.|:|.:.|.|:.:|. .
  Fly   186 VKFIPRRDREQEKATHFK----------NLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDE-E 239

  Fly   361 NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPYXQSEFLKRNSQQPTG 423
            .:|:.||||:::||.||.||:..::|.|:|..:.....:....|.|.. .:..|:...:|..|
  Fly   240 GRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKAG 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043
		ELAV_HUD_SF	43..404	CDD:273741	71/302 (24%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	27/77 (35%)
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	43/209 (21%)