Protein Alignment bru3 and bru1

DIOPT Version :10

• Sequence 1: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: NP_723737.1
• Gene: bru1 / 34648
• FlyBaseID: FBgn0000114
• Length: 810
• Species: Drosophila melanogaster
• Alignment Length: 416
• Identity: 184/416 - (44%)
• Similarity: 228/416 - (54%)
• Gaps: 60/416 - (14%)

  Fly    21 MNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAF 85
            |...:|:|||::|:|:|   ||||||||:|:..|:|||::|...|.|||||:||..:|.||||||
  Fly   427 MYHPIQMKPADSENRNE---RKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAF 488

  Fly    86 VKFGSQQEAQSAI-TNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFS 149
            |.|.::..|.||| ..|..::.|.|.:|.||||:|||:||::.:::||:  ..||.| ...|...
  Fly   489 VTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQI--QANLWN-LASNINI 550

  Fly   150 PYGAYAQQ----------QQQAALMAAAATAPGSAAAYMNPMA-ALATQIPHGLNGTGQPPS--- 200
            |.|..|..          ||.:.::.|.|..|.|........| .|..|:...|.|.|...|
  Fly   551 PLGQTATSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSA 615

  Fly   201 ----------LPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTI 255
                      |.:| |...|:.|.....||..:.||||||||..            || ...||.
  Fly   616 TDTSAVAAAGLLTP-MTVQNLAAIAAMTQPSLSNAAAAAAAATS------------PG-SAQLTN 666

  Fly   256 PPQGL---PNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSI 317
            ....|   ||..|:.......|||.|         |........|||:||.:...  ....|..|
  Fly   667 TAALLWSDPNPMASAYMSTAAGLPQF---------GSASALSTSPLASVALSAAA--AAAAGKQI 720

  Fly   318 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQ 382
            .||||||||||||||||.|.:|...|||||||||:|||||:.|:.||||||||||||.|||.||:
  Fly   721 EGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIK 785

  Fly   383 AMNGFQIGMKRLKVQLKRPKDASRPY 408
            ||||||:|.||||||||:||| |:||
  Fly   786 AMNGFQVGTKRLKVQLKKPKD-SKPY 810

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	43/80 (54%)
		ELAV_HUD_SF	43..404	CDD:273741	170/388 (44%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	61/77 (79%)
bru1	NP_723737.1	RRM1_CELF1_2_Bruno	356..437	CDD:410040	4/9 (44%)
		SF-CC1	<435..789	CDD:273721	162/384 (42%)
		RRM_SF	443..524	CDD:473069	44/83 (53%)
		RRM3_Bruno_like	722..800	CDD:241084	61/77 (79%)