Protein Alignment bru3 and Celf4

DIOPT Version :9

• Sequence 1: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: XP_038952808.1
• Gene: Celf4 / 307540
• RGDID: 1307630
• Length: 583
• Species: Rattus norvegicus
• Alignment Length: 481
• Identity: 218/481 - (45%)
• Similarity: 260/481 - (54%)
• Gaps: 114/481 - (23%)

  Fly    21 MNRALQLKPAENESRS--------EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPD 77
            |||.:|:|||::|||.        ...|||||||||:|||:|||||::|..||.|||||||||||
  Rat   124 MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD 188

  Fly    78 GASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 142
            |.||||||||:.|..|||:||..|||||||||||||||||:|||:|||.:||||||||.|.:.||
  Rat   189 GNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNP 253

  Fly   143 FVFNQFSPYGAYAQ--QQQQAALMAAAATAPGSAAAYMNPMAALAT---QIPHGLN--------- 193
            ... .|..||||||  .||||||||:.|     ...|:|||||.|.   |....||
  Rat   254 MAI-PFGAYGAYAQALMQQQAALMASVA-----QGGYLNPMAAFAAAQMQQMAALNMNGLAAAPM 312

  Fly   194 ----GTGQPPSLPSPTMPNF--NMGAN-------TPNGQPGGAAAAAAAAAAADGVFTNGIPQTA 245
                |...||.:.:|.:|:.  .:|.|       ..||||           ||:.||.|||
  Rat   313 TPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQP-----------AAEAVFANGI---- 362

  Fly   246 FPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPG-VAFPAVYGQFPQALPPPLAAVAPTQREDF 309
               ||.....|....|      ||.|:.|:..:.| .|:||.|||..||.|.|...:...|||
  Rat   363 ---HPYPAQSPTAADP------LQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQRE-- 416

  Fly   310 LMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNP 374
                     |||||||.|||||||||||||||||||||||||||||:|||||||||||    .:|
  Rat   417 ---------GPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG----RHP 468

  Fly   375 ASAQAAIQAMNGFQIG----------------------MKRLKVQLKRPKDASRPYXQSEFLKRN 417
            ..::....:..|.|..                      :.||: :|::|......:...|.|...
  Rat   469 VPSRCQAPSCQGGQCAISSSARSGPGRPRGNPGPGPSCLARLR-ELRQPGQRPDRHPGHERLPDR 532

  Fly   418 SQQPTGA----------TTSATGALP 433
            .::..||          ..||.|::|
  Rat   533 HEEAQGAAEAAQRRQSPVLSAGGSVP 558

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	63/79 (80%)
		ELAV_HUD_SF	43..404	CDD:273741	197/410 (48%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	52/99 (53%)
Celf4	XP_038952808.1	RRM1_CELF3_4_5_6	49..135	CDD:410041	7/10 (70%)
		PABP-1234	<56..378	CDD:130689	139/283 (49%)
		RRM2_CELF3_4_5_6	151..231	CDD:410043	63/79 (80%)
		RRM_SF	417..>465	CDD:418427	45/47 (96%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	133	1.000	Domainoid score	I4915
eggNOG	1	0.900	-	-		E1_KOG0144
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	377	1.000	Inparanoid score	I2015
OMA	1	1.010	-	-		QHG54704
OrthoDB	1	1.010	-	-		D1209165at2759
OrthoFinder	1	1.000	-	-		FOG0000286
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100683
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X208
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.840