DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru3 and Celf4

DIOPT Version :10

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001349204.1 Gene:Celf4 / 108013 MGIID:1932407 Length:554 Species:Mus musculus


Alignment Length:463 Identity:218/463 - (47%)
Similarity:262/463 - (56%) Gaps:98/463 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MNRALQLKPAENESRS---------EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGP 76
            |||.:|:|||::|||.         .|  ||||||||:|||:|||||::|..||.||||||||||
Mouse   124 MNRPIQVKPADSESRGGSSCLRQPPSH--RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP 186

  Fly    77 DGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLN 141
            ||.||||||||:.|..|||:||..|||||||||||||||||:|||:|||.:||||||||.|.:.|
Mouse   187 DGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFN 251

  Fly   142 PFVFNQFSPYGAYAQ--QQQQAALMAAAATAPGSAAAYMNPMAALAT---QIPHGLN-------- 193
            |... .|..||||||  .||||||||:.|     ...|:|||||.|.   |....||        
Mouse   252 PMAI-PFGAYGAYAQALMQQQAALMASVA-----QGGYLNPMAAFAAAQMQQMAALNMNGLAAAP 310

  Fly   194 -----GTGQPPSLPSPTMPNF--NMGAN-------TPNGQPGGAAAAAAAAAAADGVFTNGIPQT 244
                 |...||.:.:|.:|:.  .:|.|       ..||||           ||:.||.|||   
Mouse   311 MTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQP-----------AAEAVFANGI--- 361

  Fly   245 AFPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDF 309
                ||.....|....|      ||.|:.|:..:.|.|:||.|||..||.|.|...:...|||  
Mouse   362 ----HPYPAQSPTAADP------LQQAYAGVQQYAGPAYPAAYGQISQAFPQPPPMIPQQQRE-- 414

  Fly   310 LMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNP 374
                     |||||||.|||||||||||||||||||||||||||||:|||||||||||    .:|
Mouse   415 ---------GPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG----RHP 466

  Fly   375 ASAQAAIQAMNGFQIGM----KRLKVQLKRPKDASRPYXQSEFLKRNSQQPTGA----------T 425
            ..::....:..|.|..:    :||: :|::|...:..:...|.|....::..||          .
Mouse   467 VPSRCQAPSCQGGQCAISSSARRLR-ELRQPGQRTDRHPGHERLPDRHEEAQGAAEAAQRRQSPV 530

  Fly   426 TSATGALP 433
            .||.|::|
Mouse   531 LSAGGSVP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 62/79 (78%)
ELAV_HUD_SF 43..404 CDD:273741 197/391 (50%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 52/81 (64%)
Celf4NP_001349204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..39
RRM1_CELF3_4_5_6 49..135 CDD:410041 7/10 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..149 10/24 (42%)
RRM2_CELF3_4_5_6 150..230 CDD:410043 63/81 (78%)
Necessary for TNNT2 exon 5 inclusion. /evidence=ECO:0000250 238..257 11/19 (58%)
RRM_SF 415..>463 CDD:473069 45/47 (96%)
Blue background indicates that the domain is not in the aligned region.

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