DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru3 and celf5b

DIOPT Version :9

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_021322092.1 Gene:celf5b / 101884815 ZFINID:ZDB-GENE-070912-150 Length:334 Species:Danio rerio


Alignment Length:383 Identity:212/383 - (55%)
Similarity:242/383 - (63%) Gaps:67/383 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGS 104
            |||||||||:|||||:||.::|.|:|.|||||:||||||.|||||||||.:..||||||..||||
Zfish     5 DRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAIGGLHGS 69

  Fly   105 QTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGA------YAQQQQQAAL 163
            |||||||||||||:|||:|||.|||||||.|...:.||.|...||.|.:      :|..|||||:
Zfish    70 QTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPSVALPFSTYSSTYSTYTHALMQQQAAI 134

  Fly   164 MAAAATAPGSAAAYMNPMAAL-ATQIPH--GLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAA 225
            |||      |...|:.|..|. ||||..  .||..|.||:..:|.     .|.::|......:|.
Zfish   135 MAA------SHGGYLAPSVAFPATQIHQVGALNMNGLPPTPMTPV-----SGLSSPPANLASSAV 188

  Fly   226 AAAAAAAADGVFTNGIPQTAFPGHPLHLT----IPPQGLPNGDAA-TLQHAFPGLPPFPGVAFPA 285
            .:......:|.  :|||... .|||:...    :||....:..|| |||.||.|:..:       
Zfish   189 PSIVTPIVNGF--SGIPHQP-NGHPVEAVYTNGLPPYSTQSPTAADTLQQAFTGVQQY------- 243

  Fly   286 VYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVI 350
                                            :||||||||||||||||||.||||||||||:||
Zfish   244 --------------------------------TGPEGCNLFIYHLPQEFGDNELMQMFLPFGSVI 276

  Fly   351 SSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 408
            |||||:||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   277 SSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 62/79 (78%)
ELAV_HUD_SF 43..404 CDD:273741 203/374 (54%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 74/77 (96%)
celf5bXP_021322092.1 RRM <2..330 CDD:330708 206/377 (55%)
RRM2_CELF3_4_5_6 5..85 CDD:241079 62/79 (78%)
RRM3_CELF3_4_5_6 245..323 CDD:241083 74/77 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5253
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 410 1.000 Inparanoid score I1843
OMA 1 1.010 - - QHG54704
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 1 1.000 - - otm25077
orthoMCL 1 0.900 - - OOG6_100683
Panther 1 1.100 - - O PTHR24012
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X208
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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