DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru3 and celf5

DIOPT Version :10

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001090639.1 Gene:celf5 / 100036604 XenbaseID:XB-GENE-494002 Length:486 Species:Xenopus tropicalis


Alignment Length:410 Identity:215/410 - (52%)
Similarity:263/410 - (64%) Gaps:62/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAF 85
            |.|.:|:|||::|||..  |||||||||||||:|::|..:|..||:||||::||||||:||||||
 Frog   117 MARPIQVKPADSESRGG--DRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAF 179

  Fly    86 VKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSP 150
            |||.|..|||:||..|||||||||||||||||:|||:|||.:||||||.|.:.:..|.:....||
 Frog   180 VKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISP 244

  Fly   151 YGAYAQ--QQQQAALMAAAATAPGSAAAYMNPMAALAT----QIP----HGL--------NGTGQ 197
            |.||||  .|||..::   :|:.||   |::|..|..:    ||.    :||        :|...
 Frog   245 YSAYAQALMQQQTTVL---STSHGS---YLSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLHS 303

  Fly   198 PPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGLPN 262
            ||.:.:..:|  .:.|...||.| |.....::..|.|.::||.|  ..:|.....||:       
 Frog   304 PPVIGTAAVP--GLVAPLTNGFP-GLVPFPSSHPALDTIYTNSI--VPYPAQSPALTV------- 356

  Fly   263 GDAATLQHAFPGLPP----FPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 323
               .:|..:|.|:..    :|..|...|....||  |||:.    .|||           |||||
 Frog   357 ---ESLHPSFTGVQQYSAIYPTAALTPVTHSTPQ--PPPIL----QQRE-----------GPEGC 401

  Fly   324 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQ 388
            |||||||||||||.||.||||||||:||||||:||||||||||||||||||:|||.|||||||||
 Frog   402 NLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQ 466

  Fly   389 IGMKRLKVQLKRPKDASRPY 408
            |||||||||||||||.::||
 Frog   467 IGMKRLKVQLKRPKDTTQPY 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 60/79 (76%)
ELAV_HUD_SF 43..404 CDD:273741 200/382 (52%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 71/77 (92%)
celf5NP_001090639.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
RRM1_CELF3_4_5_6 42..128 CDD:410041 6/10 (60%)
PABP-1234 <49..374 CDD:130689 123/279 (44%)
RRM2_CELF3_4_5_6 134..214 CDD:410043 60/79 (76%)
RRM3_CELF3_4_5_6 397..475 CDD:241083 71/77 (92%)
Blue background indicates that the domain is not in the aligned region.

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