Sequence 1: | NP_001261806.1 | Gene: | Liprin-beta / 39524 | FlyBaseID: | FBgn0036376 | Length: | 680 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097414.1 | Gene: | Liprin-gamma / 37552 | FlyBaseID: | FBgn0034720 | Length: | 1152 | Species: | Drosophila melanogaster |
Alignment Length: | 698 | Identity: | 182/698 - (26%) |
---|---|---|---|
Similarity: | 296/698 - (42%) | Gaps: | 173/698 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 KMLEAALQQMDGLIS--STATQAGSVSISGAGSS----LTLSERNLISATNVLSTAKTLALALQQ 67
Fly 68 VGLAAPAPD------PVTAAI------ISDWLETHIPRQDSDERMRRLQ---------RDKEGLA 111
Fly 112 LQYQMLAERVSEQADKIIELEGLITEKSQQLCTKEEQLQRQMISSSALETQKLELMSALSELK-L 175
Fly 176 HRTALEQANDGGSAISANIPYGSLSNINQKAFMGS------PKTPPSALRHQIKPQFHSLPRSHG 234
Fly 235 KFVNNNNNRALD------VNANSSGKQRNVAFASNEH---ILIDDNHHQAEDAMTSSFMSQF-TP 289
Fly 290 SPKLRERSARGLRNILGKLRRSNSSNCELTALEQ----AEPE--------------FRRG--GAR 334
Fly 335 ATAGGRIEWSAQTPLFGEN----------------EKHWT-----------------------TW 360
Fly 361 GAQEVCNWL-AYMGLGCYEDNCRKWLNANPSVSFFTASPVDIERELNLKMPLHRKKILLAIDDLT 424
Fly 425 GKEFDDLTLKASSLDVTWV-LRWLDDIGLPQYKDYFMQAKIDGRMLHRLTLEDLSQ-LHVSSCLH 487
Fly 488 IASLRAGILCMRRLSWNAEGLIRRSIKVVSEDEAAATPDRDNVELWTAHRIMGWLQTIDLSEYTP 552
Fly 553 NLRGAGVHGALMLYEPRFNADLLADLLSIPPSKSLLRRHLAMHFKELV 600 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Liprin-beta | NP_001261806.1 | SAM_liprin-beta1,2_repeat1 | 357..422 | CDD:188962 | 22/88 (25%) |
SAM | 359..423 | CDD:197735 | 21/64 (33%) | ||
SAM_liprin-beta1,2_repeat2 | 438..499 | CDD:188965 | 28/62 (45%) | ||
SAM | 439..499 | CDD:197735 | 27/61 (44%) | ||
SAM_liprin-beta1,2_repeat3 | 529..600 | CDD:188968 | 32/70 (46%) | ||
SAM | 530..599 | CDD:197735 | 32/68 (47%) | ||
Liprin-gamma | NP_001097414.1 | TBPIP | <341..437 | CDD:284512 | 22/111 (20%) |
SAM_kazrin_repeat1 | 718..787 | CDD:188963 | 21/70 (30%) | ||
SAM | 719..781 | CDD:197735 | 20/63 (32%) | ||
SAM_kazrin_repeat2 | 796..860 | CDD:188966 | 28/63 (44%) | ||
SAM | 805..860 | CDD:197735 | 24/54 (44%) | ||
SAM_kazrin_repeat3 | 882..953 | CDD:188969 | 33/71 (46%) | ||
SAM | 885..>934 | CDD:197735 | 22/48 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D22196at6960 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |