| Sequence 1: | NP_001261806.1 | Gene: | Liprin-beta / 39524 | FlyBaseID: | FBgn0036376 | Length: | 680 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038934101.1 | Gene: | Ppfibp2 / 308918 | RGDID: | 1565383 | Length: | 981 | Species: | Rattus norvegicus |
| Alignment Length: | 937 | Identity: | 262/937 - (27%) |
|---|---|---|---|
| Similarity: | 382/937 - (40%) | Gaps: | 312/937 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 AEGSKMLEAALQQMDGLISSTATQA----GSVSISGAGSSLTLSERNLISATNVLSTA-KTLALA 64
Fly 65 LQQVGLAAPAPDPVTAAIISDWLETHIPR---------QDSDERMRRLQRDKEGLALQYQMLAER 120
Fly 121 VSEQADKIIELEGLITEKSQQLCTKEEQLQRQMISSSALETQKLELMSALSELKL---------- 175
Fly 176 ------------------------------HRTALEQ---ANDGGSAISA--------------- 192
Fly 193 ---------------NIPYGSLSN----------------------------------------- 201
Fly 202 ---------------------------------------------------------------IN 203
Fly 204 QKAFMGS-------PKTPPSALRHQIKPQFHS-------LPR---------------------SH 233
Fly 234 GKFVNNN-------------------------------NNRA------LDVNANSSGKQR---NV 258
Fly 259 AFASNEHILIDDNHHQAEDAMT-----------SSFMSQFTPSPKLRERSARGLRNILGKLRRSN 312
Fly 313 SSNCELTALEQAEPEFRRGGARATAGGRIEWSAQTPLFGEN---EKHWTTWGAQEVCNWLAYMGL 374
Fly 375 GCYEDNCRKWLNANPSVSFFTASPVDIERELNLKMPLHRKKILLAIDDLTGKEFDDLTLKASSLD 439
Fly 440 VTWVLRWLDDIGLPQYKDYFMQAKIDGRMLHRLTLEDLSQLHVSSCLHIASLRAGILCMRRLSWN 504
Fly 505 AEGLIRRSIKVVSEDEAAATPDRDNVELWTAHRIMGWLQTIDLSEYTPNLRGAGVHGALMLYEPR 569
Fly 570 FNADLLADLLSIPPSKSLLRRHLAMHFKELVGRPVILSKRDAESAPGYQPLSITAKLKPVKRTQF 634
Fly 635 S----LKRRKSSKSQSDVDWTEYVCPM 657 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Liprin-beta | NP_001261806.1 | SAM_liprin-beta1,2_repeat1 | 357..422 | CDD:188962 | 26/64 (41%) |
| SAM | 359..423 | CDD:197735 | 26/63 (41%) | ||
| SAM_liprin-beta1,2_repeat2 | 438..499 | CDD:188965 | 34/60 (57%) | ||
| SAM | 439..499 | CDD:197735 | 33/59 (56%) | ||
| SAM_liprin-beta1,2_repeat3 | 529..600 | CDD:188968 | 41/70 (59%) | ||
| SAM | 530..599 | CDD:197735 | 41/68 (60%) | ||
| Ppfibp2 | XP_038934101.1 | SMC_prok_B | 109..>377 | CDD:274008 | 45/267 (17%) |
| CBD_TRPV5_C | 480..>525 | CDD:412091 | 6/44 (14%) | ||
| SAM_liprin-beta1,2_repeat1 | 627..690 | CDD:188962 | 26/64 (41%) | ||
| SAM_liprin-beta1,2_repeat2 | 701..763 | CDD:188965 | 34/61 (56%) | ||
| SAM_liprin-beta1,2_repeat3 | 786..857 | CDD:188968 | 41/70 (59%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166345447 | |
| Domainoid | 1 | 1.000 | 156 | 1.000 | Domainoid score | I4094 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1899 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 395 | 1.000 | Inparanoid score | I1901 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D255905at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002604 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45540 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_104783 | |
| Panther | 1 | 1.100 | - | - | O | PTHR12587 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1710 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.800 | |||||