DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt20 and AT1G72390

DIOPT Version :9

Sequence 1:NP_001287062.1 Gene:Spt20 / 39522 FlyBaseID:FBgn0036374 Length:1873 Species:Drosophila melanogaster
Sequence 2:NP_001321648.1 Gene:AT1G72390 / 843571 AraportID:AT1G72390 Length:1325 Species:Arabidopsis thaliana


Alignment Length:1615 Identity:326/1615 - (20%)
Similarity:518/1615 - (32%) Gaps:529/1615 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 SSDAAGLGTGTGSHRSRPKPLAQDESQS-------------KTEAGHAKHDFGLVEVLRWPYEN- 437
            ::|.:.:|..:|..:.....::.|...|             ||.....:..|..|..:..||:. 
plant    39 ATDDSNIGDVSGFSKPSLPDISPDHEVSFILSLYPNGYSIGKTSEAMQQISFRDVPKVLHPYDRA 103

  Fly   438 -DLLLQCIDREMLP-EFLMDLLVAETVSLSDGEGTRVYAKPSVFYAGCVIAQIRDFRQTFATSTN 500
             :.||..|:...|| :.|.|:                   |..|..|.||.::.|:|:  .||:.
plant   104 AEGLLSAIEAGRLPGDILEDI-------------------PCKFVDGVVICEVHDYRK--HTSSQ 147

  Fly   501 ICD-MKHILLRPTNATLFAEVQQMG-SQLPAEDKLALESQLVLATAEPLCLEPDPSIGRQAINSQ 563
            :.. :..:.|:.:...:..::..|. :.....|.:.:||:::.|....|||:|.|.:.|.:.|..
plant   148 VSPVINKLRLKMSLENVVKDIPSMSDNSWTYGDLMEVESRILKALQPELCLDPLPRLDRLSKNPL 212

  Fly   564 HQRQLYNSHELRR-QMKKFTQTAINRKRKLDQFTHHHGLELCDYLARLRQRPRTGSSSGGANATP 627
            ..:...:...||| ::::..:..:..:.|:      .|.::|  :.||.:....|:..|..    
plant   213 TAKLDLSLSTLRRKRLRQMAEVTVMSQNKI------QGKKVC--IDRLPESSERGNLPGHL---- 265

  Fly   628 ATAPTNNPLVGAMLSSFTSKVPRRPHEVIRPIRPPTLEYPANLKVPEHVISVEKYAKAYEPLNEF 692
            ....|||                  ::.|:.:....|   |.|:              .:||.: 
plant   266 IMQQTNN------------------NQAIQNLGTNML---AGLR--------------SQPLQD- 294

  Fly   693 SEACKDGCQPNCRHNFQPQLVEEY--ILETEREASEGRRALYHIKLSIFQRPSDAEYLGELYVDR 755
                    .||......|...:.|  |..|.....:|..:     :|:    |.|. .|.|....
plant   295 --------APNSSLALVPPQQQRYMGIGSTRNTQDQGSNS-----VSV----SGAS-PGGLDAML 341

  Fly   756 DYREGERNGESCRFALGTRVHANRYIQQFREIFTEEGRKAVKITHLIPGHMPIV--------THT 812
            .|.....|.       ||..|..|..|:.:........|..:::|:.|..:|..        .|.
plant   342 PYGSDSMNP-------GTSFHRKRESQEGQMSSMPGLNKRTRVSHMGPDGVPQQQLGQRMDGLHG 399

  Fly   813 GLTNEQRILLQQQ----QQQQQRQAQMQQQQQQQQQQVVVVANQQQQSQQQQQTQQAGQQLSATV 873
            ..||.:..|||.|    :..|.....:|:....|.:.|:   ||:....|...:||.|.:.::  
plant   400 SDTNWKNTLLQHQDMLGRSIQYPNTSIQRFSPHQMEGVM---NQEGGPMQFPASQQGGMKYTS-- 459

  Fly   874 HHVALPRQQITQKTLNLAGSNVINV-----QQNFRQQSAQQQQPQTYTIEAPQQQAAAQIVPQQQ 933
                   ::...:|..:.|....|:     ..|......|.:.|....|.:...|.:..:.|.||
plant   460 -------KEEPFETGKIDGGTRNNIPGVGSDANDLDPRIQSRMPHNAFIRSNFPQTSWNVNPGQQ 517

  Fly   934 QQQQQQQQQHIHLQQLATGSSNTSTTTHQVSLSNGSLVLVQQQQPQQQSQQLAQALQHSGITIQP 998
            .:::.::::....:                         :..|.|:         |...|....|
plant   518 IEKEPKKEEQFSRR-------------------------ISAQSPR---------LSAGGPPQSP 548

  Fly   999 ATIQQQQQQVKGTSVVGANSALRAQLNSNVPILQTQLKVQQQQIMQKQQQQQTTATSNNNNNNNN 1063
              :..:..:..|.|:.....|:.|                    .||.:                
plant   549 --LSSKSGEFSGGSMGTHYGAVAA--------------------AQKDK---------------- 575

  Fly  1064 NNNMNNNTAIHPNPAINAIVNSIMNSANQYQQQQQQQHQQQHQQQTGNTSSNNNAAGSGGSTNNN 1128
                    |:...|||.| ..|:.:|||:..||:|.|.|...:::|       |:.......:..
plant   576 --------AVTSIPAIGA-TQSVGSSANEAMQQRQHQAQMAAKRRT-------NSLPKTQVISTV 624

  Fly  1129 GSSTSATTLKNSSNASILNLLNSAPAAMTSTPVASGTFTTSTGQQQPQTLTLVQHQQQSTPNTAD 1193
            ||..|..|:....||.                      :.|.|.|     ||..|......:..:
plant   625 GSPVSVNTISVPVNAR----------------------SPSVGPQ-----TLGDHAILDRFSKIE 662

  Fly  1194 AATATY--------VQTTRGTPTLVSTQRKQQSSEVLQNLLN----------ANRKIGGGGTTTT 1240
            ...|.|        |......|.:.:   ||..:..|.||.|          .::.|.||...|.
plant   663 RVAARYQLNCKKHKVDEYSRRPRVYA---KQPLTVCLSNLSNEEVFKDEDEALSKSIFGGSMNTY 724

  Fly  1241 TFRTNSAGNLIAVNLNQAGQSHHQQTGDGSQTVRVSMSALASQLASPPAVMTNPTTSYTVISSGN 1305
            ..|....|                      |..||...::.|.:         |.....::.|..
plant   725 KTRVIHFG----------------------QMERVMQGSVPSFI---------PRNRTRLVMSEK 758

  Fly  1306 SAAAAAAWIQSPT--GPVQQRILSSLRRDSTTAPPNAIVVG---------------------MAA 1347
            :.....||.|...  |.|.|      ..|...|.||..:..                     ||.
plant   759 AVDGTVAWYQGDVDEGDVFQ------AEDFLLALPNTHIADLLATQFKSLMAREGYMIEEHIMAK 817

  Fly  1348 PSPGS----DSNASNASGF--------------AVPNNLASTSSGGGGGG----GALSALLTNAA 1390
            |:.|.    .|:.::|.|:              ||....:..:|..|..|    .:...:|.||.
plant   818 PNRGDTGPISSHPNSAGGYPRGYSANDMQQYGDAVAGQASGEASKHGNTGNTPNNSTQNILANAR 882

  Fly  1391 TPSPSGSDHSQSSQTHQNQALLERLSNVTSNVSAVSMPHMSPQQPQPTQQFITKTIVHSPATSSI 1455
            ...|:.|...|.|     |.||          |.|||| |.|||..|.|.          |..|.
plant   883 MVPPTNSQALQMS-----QGLL----------SGVSMP-MQPQQLDPQQS----------ALLSS 921

  Fly  1456 HSPMSSPHPQPSASPQQQQQQQQQQT--TATLNLQGINLSQLQGAMANFAGLQNVQVQIPGFT-- 1516
            ||...:   |.|...|||..|.|:.:  ..|..|..||      :|:..:|:|      ||..  
plant   922 HSQQKN---QQSMFTQQQHPQMQRPSMILPTNPLSAIN------SMSQSSGMQ------PGGQMA 971

  Fly  1517 ---QPISLQFSGNSLQQQQSG--------NTATGAGTAQGQQRSVLVSVPVSSQQQQLPHTITLQ 1570
               .|:.||.    |||||..        ...:|.|...|.                        
plant   972 NKYSPLQLQM----LQQQQQAAVQKKIMMGLGSGVGMGMGM------------------------ 1008

  Fly  1571 TQSAPHHQQQHQQTQQQHAPPTGTIVSLPSSGPGTQTVVITNNSGGGVTAGSSTSGSAGGG-GGS 1634
                                  |..:.:.|.|          ||..|:.|..:....||.| ||:
plant  1009 ----------------------GMGMGMGSMG----------NSIAGLGALGNQLNMAGRGMGGT 1041

  Fly  1635 GATTAMLTLPIAQIVGAGVQKLNPQTIRTSNVGGGIGIAQQ------TVQQQTIQSQ-------S 1686
            |.:::| ::|....:|.....|||    .||:.   .|:||      |.||..:.:|       .
plant  1042 GISSSM-SVPGIGNMGQNPMNLNP----ASNLN---AISQQLRSGALTPQQNALFTQIRMGMANR 1098

  Fly  1687 GGNSTAAIQLLGTIQPRARNVQVVGTKQLANRQLITTQRQIGGSTLKIATTPVNAANVVTSSA-- 1749
            ||       ::|.  |:.....|.||            ||:..|:..::....|.||:..::|  
plant  1099 GG-------VMGA--PQTGISGVSGT------------RQMHPSSAGLSMLDQNRANLQRAAAMG 1142

  Fly  1750 NLTTTPIVMSAQKLQLKTVKAPVQQQQQPQQQQQQLQQQHRILNQQSTATVSSQTLPSPNQVQVA 1814
            |:....::.....|.:...:...|.||||||||.|.|||    .||..:..|.|...||.|.|..
plant  1143 NMGPPKLMPGMMNLYMNQQQQQQQLQQQPQQQQLQHQQQ----LQQPMSQPSQQLAQSPQQQQQL 1203

  Fly  1815 QQQQQQQQQLQHIQIAGRATTASGAISQRTLTALAAAKQQQQQQQAAVNRRRSTT 1869
            ||.:|.||..|..|  ..|:.....:|...:.:.:|...|||.||::..:....|
plant  1204 QQHEQPQQAQQQQQ--ATASPLQSVLSPPQVGSPSAGITQQQLQQSSPQQMSQRT 1256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt20NP_001287062.1 Spt20 429..559 CDD:288908 30/134 (22%)
AT1G72390NP_001321648.1 Spt20 62..202 CDD:314896 34/160 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13526
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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