DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spt20 and SUPT20H

DIOPT Version :10

Sequence 1:NP_648659.2 Gene:Spt20 / 39522 FlyBaseID:FBgn0036374 Length:1873 Species:Drosophila melanogaster
Sequence 2:XP_005266504.1 Gene:SUPT20H / 55578 HGNCID:20596 Length:859 Species:Homo sapiens


Alignment Length:1023 Identity:237/1023 - (23%)
Similarity:380/1023 - (37%) Gaps:282/1023 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 NSNSKPPS-SVCQSGNSKFFNLHEKIRDLYLQLLSNDLNYFAETGLKQRTRSFT--LERLVDREK 344
            ::..:||. ....||....|   :|:.|||::....      |..:||:.|...  ||:||.:|.
Human    18 SARQRPPKRKYLSSGRKSVF---QKLYDLYIEECEK------EPEVKQKLRRNVNLLEKLVMQET 73

  Fly   345 LNTIVVNLYPGNKGYSLALHYDEHMVLNPQTNEWSPTDKDETSSDAAGLGTGTGSHRSRPKPLAQ 409
            |:.:||||||||:||||.|                   :.:..||:                   
Human    74 LSCLVVNLYPGNEGYSLML-------------------RGKNGSDS------------------- 100

  Fly   410 DESQSKTEAGHAKHDFGLVEVLRWPYENDLLLQCIDREMLPEFLMDLLVAETVSLSDGEGTRVYA 474
                               |.:|.|||...||:.:|.|.||..|:|||....|            
Human   101 -------------------ETIRLPYEEGELLEYLDAEELPPILVDLLEKSQV------------ 134

  Fly   475 KPSVFYAGCVIAQIRDFRQTFATSTNICDMKHILLRPTNATLFAEVQQMGS---QLPAEDKLALE 536
              ::|:.|||||:|||:||:....:.....:|||||||..||..:|..:.|   :...||||.||
Human   135 --NIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLE 197

  Fly   537 SQLVLATAEPLCLEPDPSIGRQAINSQHQRQLYNSHELRRQMKKFTQTAINRKRKLDQFTHHHGL 601
            |||:|||||||||:|..::...|....:.:|..|:..::|..|:::::::||::.|........|
Human   198 SQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQL 262

  Fly   602 ELCDYLARLRQRPRTGSSSGGANATPATAPTNNPLVGAMLSSFTSKVPRRPHEVIRPIRPPTLEY 666
            .|.|:|.:.::| :.|                        ..:..|:.:..:.|....|.     
Human   263 RLLDFLQKRKER-KAG------------------------QHYDLKISKAGNCVDMWKRS----- 297

  Fly   667 PANLKVPEHVISVEKYAKAYEPLNEFSEACKDGCQPNC--RHNFQPQLVEEYILETEREASEGRR 729
            |.||.:|..| .||||||..:.:.      .|..||..  .|:.:    ::|:.|.|......: 
Human   298 PCNLAIPSEV-DVEKYAKVEKSIK------SDDSQPTVWPAHDVK----DDYVFECEAGTQYQK- 350

  Fly   730 ALYHIKLSIFQRPSDAEYLGELYVDRDYREGE---------RNGESCRFALGTRVHANRYIQQFR 785
                .||:|.|...|..|.|::...:...|.:         .:..|..|.:|::..|.|.:.|::
Human   351 ----TKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQ 411

  Fly   786 EIFTEEGRKAVKITHLIPGHMPIVTHTGLTNEQRILLQQQQQQQQRQAQMQQQQQQQQQQVVVVA 850
            |:...|.:..||::|...|...:                        :|:...::..|.:.|.| 
Human   412 ELVQNEAKCPVKMSHSSSGSASL------------------------SQVSPGKETDQTETVSV- 451

  Fly   851 NQQQQSQQQQQTQQAGQQLSATVHHVALPRQQITQKTLNLAGSNVINVQQNFRQQSAQQQQPQTY 915
                      |:...|:.:......:.||     ..:.|.:..|....||......:....|.:.
Human   452 ----------QSSVLGKGVKHRPPPIKLP-----SSSGNSSSGNYFTPQQTSSFLKSPTPPPSSK 501

  Fly   916 TIEAPQQQAA----------AQIVPQQQQQQQ-----------QQQQQHIHLQQLATGSSNTSTT 959
            ....|::.:.          |.:.|....|:.           .....|....|.:|.|:.::|.
Human   502 PSSIPRKSSVDLNQVSMLSPAALSPASSSQRSGTPKPSTPTPTPSSTPHPPDAQSSTPSTPSATP 566

  Fly   960 THQVSLSNGSLVLVQQQQPQQQSQQLAQALQHSGI-------TIQPAT----IQQQQQQVKGTSV 1013
            |.|.|.......|:.|...||:|  |:||:..:.|       :|.|.|    :......:...:|
Human   567 TPQDSGFTPQPTLLTQFAQQQRS--LSQAMPVTTIPLSTMVTSITPGTTATQVMANSAGLNFINV 629

  Fly  1014 VGANSALRAQLNSNVPILQTQ--------------------LKVQQQQIMQKQQQQQTTATSNNN 1058
            ||:....:|.::.:.|:|...                    |.......||...|.....     
Human   630 VGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQAASQAGVPF----- 689

  Fly  1059 NNNNNNNNMNNNTAIHPNPAINAIVNSIMNSANQYQQQQQQQHQQQHQQQTGNTSSNNNAAGSGG 1123
                   .:.|.:::.|...:.....|::  .|..||||||..|...||....|:.:....|..|
Human   690 -------GLKNTSSLRPLNLLQLPGGSLI--FNTLQQQQQQLSQFTPQQPQQPTTCSPQQPGEQG 745

  Fly  1124 STNNNGSSTSATTLKNSSNASILNL------LNSAPAAMTSTPVASG---------TFTTSTG-- 1171
            |..   .|||.....::..|:::||      :.|..|.::....|..         .|..|:.  
Human   746 SEQ---GSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQ 807

  Fly  1172 --QQQPQTLTLVQHQQQSTPNTADAATATYVQTT---------RGTPT 1208
              |||.|.|..:|||.......|..|...:.:.|         |||||
Human   808 QQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPT 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt20NP_648659.2 Spt20 433..565 CDD:463459 56/134 (42%)
SUPT20HXP_005266504.1 Spt20 77..214 CDD:463459 72/207 (35%)

Return to query results.
Submit another query.