Protein Alignment Spt20 and spt20

DIOPT Version :10

• Sequence 1: NP_648659.2
• Gene: Spt20 / 39522
• FlyBaseID: FBgn0036374
• Length: 1873
• Species: Drosophila melanogaster
• Sequence 2: NP_001342846.1
• Gene: spt20 / 2543675
• PomBaseID: SPAC4D7.10C
• Length: 473
• Species: Schizosaccharomyces pombe
• Alignment Length: 748
• Identity: 131/748 - (17%)
• Similarity: 210/748 - (28%)
• Gaps: 370/748 - (49%)

  Fly   394 GTGTGSHRSRPKPLAQDESQSKTEAGHAKHDFGLVEVLRWPYEN-----------DL-------- 439
            |.|..::|...|.|:.|:.|:| :...:..|..|.::    |||           |:
pombe     6 GLGDYTYRYHGKELSLDDFQNK-QGIESSDDAFLSKI----YENVSNFNVPRKLHDIEHKFSKEE 65

  Fly   440 -----------------------------LLQCIDREMLPEFLMDLLVAETVSLSDGEGTRVYAK 475
                                         :||.|..|::|...:::.....|.
pombe    66 PSLILHIHKFHFRFEQQDGAFTYNGPVKSILQYIRMELIPPDCLEVFRNSDVK------------ 118

  Fly   476 PSVFYAGCVIAQIRDFRQTFAT-------------------------------STNICDMKHILL 509
               ||.||:..:|.|.||:.:.                               :||...:.|.:|
pombe   119 ---FYDGCLTVRIIDHRQSPSADQTVQPQPGSTNQQQQNNTNPINNQPEDTKPNTNSPPVYHTVL 180

  Fly   510 RPTNATLFAEV----QQMGSQLPAEDKLALESQLVLATAEPLCLEPDPSIGRQAINSQHQRQLYN 570
            |||..||:.::    :...:.|..|..|.|||.::||:..||.|.|..|
pombe   181 RPTPETLWQDLCLLSESFANSLSDEAVLTLESNILLASEAPLFLTPAKS---------------- 229

  Fly   571 SHELRRQMKKFTQTAINRKRKLDQFTHHHGLELCDYLARLRQRPRTGSSSGGANATPATAPTNNP 635
                              |.::.||.:    :|.|                       :||
pombe   230 ------------------KAEMIQFMN----QLAD-----------------------SAP---- 245

  Fly   636 LVGAMLSSFTSKVPRRPHEVIRPIRPPTLEYPANLKVPEHVISVEKYAKAYEPLNEFSEACKDGC 700
                                           |...|.|:.
pombe   246 -------------------------------PCTRKKPQG------------------------- 254

  Fly   701 QPNCRHNFQPQLVEEYILETEREASEGRRALYHIKLSIFQRPSDAEYLGELYVDRDYREGERNGE 765
                    ..||.:|   |.||...|..     :.|...||            .||::
pombe   255 --------SAQLADE---EAERLEKENL-----LLLMDDQR------------KRDFQ------- 284

  Fly   766 SCRFALGTRVHANRYIQQFREI-FTEEGRKAVKITHLIPGHMPIVTHTGLTNEQRILLQQQQQQQ 829
                            ..|:.: |.|..|:                       :|.:|||:|.|.
pombe   285 ----------------PTFQRLQFIENVRR-----------------------KRAILQQRQMQM 310

  Fly   830 QRQAQMQQQQQQQQQQVVVVANQQQQSQQQQQTQQAGQQLSATVHHVALPRQQITQKTLNLAGSN 894
            |:|.:.||||..:.||  ..|:..|.:..|::|....|:|..:...:..|:.
pombe   311 QQQQKAQQQQSPKAQQ--PPAHLVQSAPVQRKTTPKIQRLPPSSIQIPPPKP------------- 360

  Fly   895 VINVQQNFRQQSAQQQQPQTYT----IEAPQQQAAAQIVPQQQQQQQQQQQQHIHLQQLATGSSN 955
                .|.|...:|..:.|...|    ...|        ||..:...:::....|.::|||
pombe   361 ----MQKFPANAASSESPPNATGNFLPSGP--------VPANEPMLKRESVDLIKIRQLA----- 408

  Fly   956 TSTTTHQVSLSNGSLVLVQQQQPQQQSQQLAQALQHSGITIQPATIQQQQQQVKGTSVVGANSAL 1020
                           :|.||:         |..|:..|.|      ::|..::.....:.|.:.|
pombe   409 ---------------ILFQQR---------ASQLKARGAT------REQITEILNRQAIAAGTDL 443

  Fly  1021 RAQLNSNVPILQTQLKVQQQQIMQKQQQQQTTA 1053
                 :.|..:...|..||.|:.|:|||||..|
pombe   444 -----ATVMTVARNLHFQQLQMRQQQQQQQMKA 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spt20	NP_648659.2	Spt20	433..565	CDD:463459	40/214 (19%)
spt20	NP_001342846.1	Spt20	62..240	CDD:463459	39/230 (17%)