DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abp1 and ABP1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_010012.1 Gene:ABP1 / 850450 SGDID:S000000684 Length:592 Species:Saccharomyces cerevisiae


Alignment Length:648 Identity:145/648 - (22%)
Similarity:244/648 - (37%) Gaps:180/648 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VSFEKNRAQIVAAW-KDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAF 66
            :.:..:..:|.|.: |.|.....||.|.:.....: .|.:..:||....|.| :..:..|:.|..
Yeast     6 IDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAK-KEYEPESTGSSFHDFL-QLFDETKVQYGL 68

  Fly    67 VRIEDPKTGLNKYLLINWQGEGAPV-LRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLK 130
            .|:..|.:.:.|.::|.|..:.||: .|....||.....:||..|.|:.:.||:|||:|.:.||.
Yeast    69 ARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLM 133

  Fly   131 KLSTVSSA-YSFKEPRGAMEEQKA---PVGTNYTRVIPTK------------------------E 167
            |:|..:.| ||.:  ..:.::.||   ||..::|   |:|                        .
Yeast   134 KISNAAGARYSIQ--TSSKQQGKASTPPVKKSFT---PSKSPAPVSKKEPVKTPSPAPAAKISSR 193

  Fly   168 LNASVMQDFWKKEEAEE--------KLRQEAEKESKRLELQKLEQEQRSREEKEHKEREKLVIST 224
            :|.:...|.|.:.|.:|        |..|.:.|...:::|||:..|::::|:.  :..:|...:.
Yeast   194 VNDNNDDDDWNEPELKERDFDQAPLKPNQSSYKPIGKIDLQKVIAEEKAKEDP--RLVQKPTAAG 256

  Fly   225 TKLQPA--------HVPIK-----------TSPQPLS-------PEKTAPGFANNLTDAERMRQA 263
            :|:.|:        ...:|           |.|..::       .:|...||.|..:.|:...:.
Yeast   257 SKIDPSSDIANLKNESKLKRDSEFNSFLGTTKPPSMTESSLKNDDDKVIKGFRNEKSPAQLWAER 321

  Fly   264 RNQEARELIGSRVGAAKAMFTKHTSEGQ-----LQSKL---------------NTQPPAKPARNS 308
            :.::......::..|.|....:...||:     |:||.               ...||.|.:..:
Yeast   322 KAKQNSGNAETKAEAPKPEVPEDEPEGEPDVKDLKSKFEGLAASEKEEEEMENKFAPPPKKSEPT 386

  Fly   309 IAQRINVFNQNQPQDAPVPSPPRAASPAK-----------PLP---------------------- 340
            |.         .|:....|..|..|..|:           |||                      
Yeast   387 II---------SPKPFSKPQEPVKAEEAEQPKTDYKKIGNPLPGMHIEADNEEEPEENDDDWDDD 442

  Fly   341 -VEAPEPVVPAPAIAPAAPVAAEVVSTIAEVEESQPVDDLPLAHESEQFSTIKRSPHSKSNSLQS 404
             .||.:|.:|:..:|..|||..|      |.|:.:....||                 ..||:.:
Yeast   443 EDEAAQPPLPSRNVASGAPVQKE------EPEQEEIAPSLP-----------------SRNSIPA 484

  Fly   405 QSPDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTLERNALTDLVNEDDFICQET 469
            ...:|         |..|..|||:..:......|..|..|:......|.|..:...:::      
Yeast   485 PKQEE---------APEQAPEEEIEEEAEEAAPQLPSRSSAAPPPPPRRATPEKKPKEN------ 534

  Fly   470 LGDLGQRARALYDYQAADETEITFDPGDVITHIDQIDEGWWQG-LGPDGTYGLFPANYVEIIN 531
                 ..|.|.|||.||::.|:||...|.|.:|:.:|:.||.| |..||:.||||:|||.:.|
Yeast   535 -----PWATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 38/136 (28%)
DBINO <173..>207 CDD:290603 11/41 (27%)
SH3_Abp1_eu 476..529 CDD:212893 27/53 (51%)
ABP1NP_010012.1 ADF_drebrin_like 6..141 CDD:200437 38/136 (28%)
PTZ00108 <148..404 CDD:240271 46/269 (17%)
SH3_Abp1_fungi_C2 536..590 CDD:212894 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346198
Domainoid 1 1.000 54 1.000 Domainoid score I2772
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I1393
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46800
orthoMCL 1 0.900 - - OOG6_104762
Panther 1 1.100 - - LDO PTHR10829
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R73
SonicParanoid 1 1.000 - - X2518
TreeFam 00.000 Not matched by this tool.
109.910

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