DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abp1 and si:dkey-40c11.2

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_005165493.1 Gene:si:dkey-40c11.2 / 798260 ZFINID:ZDB-GENE-060526-300 Length:745 Species:Danio rerio


Alignment Length:765 Identity:178/765 - (23%)
Similarity:294/765 - (38%) Gaps:258/765 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAF 66
            |::.:.....::.|.:|:|:.::.|||:||.|||.:|.||:..:|.||:.||....::.:.:|..
Zfish     3 AINLDTYSLSLLTAKEDILNPRASTNWALFTYEGVSNNLKLTDSGAGGLTELVGKFHNSRPVYGL 67

  Fly    67 VRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLKK 131
            .|:...:||..:.:::.|.|:|...||:..||:|:..:.|....|...|.|..:|::..:::|..
Zfish    68 CRVGLTETGQPQIVMVCWVGDGVDELRRAECASHVPAIKNFFKEAQAFITASQQDEVTEEQILAA 132

  Fly   132 LSTVSSAYSFKEPRGAMEEQKAP---------VGTNYTRVIPTKELNASVMQDFWKKEEAEEKLR 187
            ::.:         |..||..:.|         |||||.:.....|:.......||.:.|.||:.|
Zfish   133 VAKI---------RPPMERMRRPSKTVDKEETVGTNYRKTNAAMEMRRINRDSFWARAEREEEER 188

  Fly   188 QEAE-----------------KESKRLE---------LQKLEQEQR-----------------SR 209
            :|.|                 ||.|..|         ||.:|:::|                 .:
Zfish   189 KEEERRRALEDRRRWERERVLKEKKEAEERDRKMNEKLQMIEEQRRIQAQLEEEGRKVEKSKWEQ 253

  Fly   210 EEKEHKE--REKLVISTTKLQPAHVPIKTSPQPLSPEK------------TAPG----------- 249
            :::||:|  |.:|..|.:..:.|......|.:.::|.:            ::||           
Zfish   254 QQREHEEDMRARLRRSESIEKAAEAAALVSQRTMNPREFFRQLSASSQNSSSPGSPRSGKSPFRR 318

  Fly   250 FANNLTDAERMRQARNQEARELIGSRVG-------AAKAMFTKHTSEGQLQSKLNTQPPAKPARN 307
            :..:|||...:.:..|        |..|       :|::.||:..|.....|......|..|...
Zfish   319 YQRSLTDTAFIFERTN--------STSGPTSPLSPSARSPFTRTASTSSYTSYKCPTSPLSPTFR 375

  Fly   308 SIAQRINVFNQNQPQDAPVPSPPRAASPAKPL--------------PVEAPEPVVPA-PAIAPAA 357
            .|..     .|:.|...|...|||:..|..||              |...|.|..|. |:..||:
Zfish   376 RIPS-----PQHPPTSPPTSPPPRSVPPLSPLPSLPVSRPPPPQSTPPSRPPPQAPVQPSAPPAS 435

  Fly   358 PVAAEVVST----IAEV--EESQPVDDLPLAHESEQ----FSTIKRSP---HSKS---------- 399
            |...::::.    |.||  ||.....:.|.|..||.    ...:..||   .|||          
Zfish   436 PEPLDILNKSETYICEVNQEEFTVATERPTASLSENAINTTDLVTASPMLCESKSEVDFTVRAVL 500

  Fly   400 ----------NSLQSQSPDETTSSN--------ETDTAVSQEQEEE-------VRTKVSVTVQQS 439
                      :.::.:.||:.::|:        ||...|::|.|.|       :|..|.|..|:.
Zfish   501 VEEDEDEEEDDKVEVEEPDQPSTSDIKGSTNYEETVETVAEEVECEDEDEKSIIRPLVEVEEQEQ 565

  Fly   440 QSVKSS----------------GMSTL---------ERNALTD---------------------- 457
            :::..|                ..:|:         :||.::|                      
Zfish   566 ETMSESEDEEDAEEKPAAESLDNQNTIVEEHLQAEEDRNVISDDEAEEDPPENQELCVNVSEFEL 630

  Fly   458 LVNEDDFIC-----------------------------------QETLGDLGQ-------RARAL 480
            :..||:|.|                                   .|.|.:.|:       |.|||
Zfish   631 MTGEDEFECGTPLNGTVEDVDVSEHSTPERYCYTVNREEEDEIQTEVLKENGESSPERLLRVRAL 695

  Fly   481 YDYQAADETEITFDPGDVITHIDQIDEGWWQGLGPDGTYGLFPANYVEII 530
            |||||.|:||::|:|||:|:.::.||:.||:|...||..||||||:||.|
Zfish   696 YDYQAEDDTELSFEPGDIISDVETIDKAWWRGCSKDGRQGLFPANFVETI 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 37/134 (28%)
DBINO <173..>207 CDD:290603 15/59 (25%)
SH3_Abp1_eu 476..529 CDD:212893 31/52 (60%)
si:dkey-40c11.2XP_005165493.1 ADF_drebrin_like 4..139 CDD:200437 38/143 (27%)
SH3_Abp1_eu 691..744 CDD:212893 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 1 1.000 - - FOG0004274
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2518
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.