DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and dbn1

DIOPT Version :10

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_031753866.1 Gene:dbn1 / 733967 XenbaseID:XB-GENE-961393 Length:665 Species:Xenopus tropicalis


Alignment Length:640 Identity:152/640 - (23%)
Similarity:261/640 - (40%) Gaps:161/640 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAF 66
            :|||:.:|.:::||::||:::::..:|:|:.||..::.|.:.::|.||:.:|.....:.|:||.|
 Frog    47 SVSFKPHRPELLAAYQDVIEEQNSIDWALYTYEDNSDILTLASSGGGGLHDLASRFENQKVMYGF 111

  Fly    67 VRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLKK 131
            ..:::|...|.:|:||||.||..|..||..||:|:..:::...|..:.:||.|.||||...:.::
 Frog   112 CSVKEPHAMLARYVLINWVGEDVPDARKCACASHVAQIADFFQGVDVIVNASNVDDIDPMAIGQR 176

  Fly   132 LSTVSSAYS--------FKEPRGAMEEQKAPVGTNYTRVIPTKELNASVMQDFW---KKEEAE-- 183
            ||..|...|        .|:     |.|..||||||.:.....|:.....:.||   ||||.|  
 Frog   177 LSNGSGRLSSPVLQRLQIKD-----EGQADPVGTNYQKTNAAVEMKRINREQFWEQAKKEEEERK 236

  Fly   184 EKLRQEAEKESKRLELQKLEQEQRSREEKE--HKEREKLVISTTKLQPAHVPIKTSPQPLSPEKT 246
            |:.||:|.:|..|.|.:::|||::.:||:|  ::|||:      :::.....::...:..:.::.
 Frog   237 EEERQKALEERLRFEQERMEQERKEQEEREKRYQEREQ------QIEEHRKKLQDEEEEEAKKRQ 295

  Fly   247 APGFANNLTDAERMRQARNQEAREL--IGSRVGAAKAMFTKHT---------------------- 287
            :....|.|....:|.|..::||.||  ..|.|..|.|:..:.|                      
 Frog   296 SNSIFNCLFIPCQMDQREDEEATELKRTESEVEEAAAIIAQRTENPREFFKQQERAYSECGYTLQ 360

  Fly   288 --------------SEGQLQSKLNTQPPAKP-----ARNSIAQR--------------------- 312
                          |...::|.....||..|     .|:|:.:.                     
 Frog   361 TPRTGDWDQMDLMGSPTAVRSSSEAGPPCSPLPEPERRSSLGEEWTKTLRSEQPLEDSAWTPQGL 425

  Fly   313 -INVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEPVVPAPAIAPAAPVAAEVV------------ 364
             .:||.:.:.:|...|..|:.....:...::..|..:.:.|..|.|..|..::            
 Frog   426 TEDVFMETKEEDVGFPEAPQLTGNEEEAVMDLGEVDLMSDAHPPPAQEATNLLDLWQNDEPQDST 490

  Fly   365 -----------------STIAEVE--ESQPVDDL---------PL------AHESEQFSTIKRSP 395
                             .|..|.|  .|.|.|:|         |.      |.|..|.......|
 Frog   491 WSDRNLITSQEEVSVEKKTFVETETCPSVPEDNLLNFEELPQPPATFCDMEAEEDPQSIIHIEGP 555

  Fly   396 H----SKSNSLQSQS--PDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTLERNA 454
            |    |..::||..|  ..|.|.|..|:...||.:..:|.:.|      ::...|.|..:..:  
 Frog   556 HQMTLSYQHALQEASCHQPELTDSLLTNGETSQREGTQVTSSV------TKDTASEGYFSQSQ-- 612

  Fly   455 LTDLVNEDDFICQETLGDLGQRARALYDYQAADETEIT-FDPGDVITHIDQIDEG 508
                  ::||...|   ||..:|.....|....|.:|| :|...|:...::.:||
 Frog   613 ------DEDFAQSE---DLSAKAPLPVFYNKPPEIDITCWDSDPVMEEEEEEEEG 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 47/134 (35%)
SH3_Abp1_eu 476..529 CDD:212893 9/34 (26%)
dbn1XP_031753866.1 ADF_drebrin_like 48..183 CDD:200437 47/134 (35%)

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