DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and dbn1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_031753866.1 Gene:dbn1 / 733967 XenbaseID:XB-GENE-961393 Length:665 Species:Xenopus tropicalis


Alignment Length:640 Identity:152/640 - (23%)
Similarity:261/640 - (40%) Gaps:161/640 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAF 66
            :|||:.:|.:::||::||:::::..:|:|:.||..::.|.:.::|.||:.:|.....:.|:||.|
 Frog    47 SVSFKPHRPELLAAYQDVIEEQNSIDWALYTYEDNSDILTLASSGGGGLHDLASRFENQKVMYGF 111

  Fly    67 VRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLKK 131
            ..:::|...|.:|:||||.||..|..||..||:|:..:::...|..:.:||.|.||||...:.::
 Frog   112 CSVKEPHAMLARYVLINWVGEDVPDARKCACASHVAQIADFFQGVDVIVNASNVDDIDPMAIGQR 176

  Fly   132 LSTVSSAYS--------FKEPRGAMEEQKAPVGTNYTRVIPTKELNASVMQDFW---KKEEAE-- 183
            ||..|...|        .|:     |.|..||||||.:.....|:.....:.||   ||||.|  
 Frog   177 LSNGSGRLSSPVLQRLQIKD-----EGQADPVGTNYQKTNAAVEMKRINREQFWEQAKKEEEERK 236

  Fly   184 EKLRQEAEKESKRLELQKLEQEQRSREEKE--HKEREKLVISTTKLQPAHVPIKTSPQPLSPEKT 246
            |:.||:|.:|..|.|.:::|||::.:||:|  ::|||:      :::.....::...:..:.::.
 Frog   237 EEERQKALEERLRFEQERMEQERKEQEEREKRYQEREQ------QIEEHRKKLQDEEEEEAKKRQ 295

  Fly   247 APGFANNLTDAERMRQARNQEAREL--IGSRVGAAKAMFTKHT---------------------- 287
            :....|.|....:|.|..::||.||  ..|.|..|.|:..:.|                      
 Frog   296 SNSIFNCLFIPCQMDQREDEEATELKRTESEVEEAAAIIAQRTENPREFFKQQERAYSECGYTLQ 360

  Fly   288 --------------SEGQLQSKLNTQPPAKP-----ARNSIAQR--------------------- 312
                          |...::|.....||..|     .|:|:.:.                     
 Frog   361 TPRTGDWDQMDLMGSPTAVRSSSEAGPPCSPLPEPERRSSLGEEWTKTLRSEQPLEDSAWTPQGL 425

  Fly   313 -INVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEPVVPAPAIAPAAPVAAEVV------------ 364
             .:||.:.:.:|...|..|:.....:...::..|..:.:.|..|.|..|..::            
 Frog   426 TEDVFMETKEEDVGFPEAPQLTGNEEEAVMDLGEVDLMSDAHPPPAQEATNLLDLWQNDEPQDST 490

  Fly   365 -----------------STIAEVE--ESQPVDDL---------PL------AHESEQFSTIKRSP 395
                             .|..|.|  .|.|.|:|         |.      |.|..|.......|
 Frog   491 WSDRNLITSQEEVSVEKKTFVETETCPSVPEDNLLNFEELPQPPATFCDMEAEEDPQSIIHIEGP 555

  Fly   396 H----SKSNSLQSQS--PDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTLERNA 454
            |    |..::||..|  ..|.|.|..|:...||.:..:|.:.|      ::...|.|..:..:  
 Frog   556 HQMTLSYQHALQEASCHQPELTDSLLTNGETSQREGTQVTSSV------TKDTASEGYFSQSQ-- 612

  Fly   455 LTDLVNEDDFICQETLGDLGQRARALYDYQAADETEIT-FDPGDVITHIDQIDEG 508
                  ::||...|   ||..:|.....|....|.:|| :|...|:...::.:||
 Frog   613 ------DEDFAQSE---DLSAKAPLPVFYNKPPEIDITCWDSDPVMEEEEEEEEG 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 47/134 (35%)
DBINO <173..>207 CDD:290603 17/38 (45%)
SH3_Abp1_eu 476..529 CDD:212893 9/34 (26%)
dbn1XP_031753866.1 ADF_drebrin_like 48..183 CDD:200437 47/134 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48548
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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