DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abp1 and Dbn1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_006517368.1 Gene:Dbn1 / 56320 MGIID:1931838 Length:707 Species:Mus musculus


Alignment Length:662 Identity:151/662 - (22%)
Similarity:264/662 - (39%) Gaps:180/662 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAFV 67
            |||..:|.:::||:::|:.::|..:|:|:.||..:::||:.|:|:||:.||:....:.|:||.|.
Mouse     4 VSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFC 68

  Fly    68 RIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDL----DRL 128
            .::|.:..|.||:||||.||..|..||..||:|:..|:....|..:.:||.:.:|||.    .||
Mouse    69 SVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRL 133

  Fly   129 LKKLSTVSSAYSFKEPRGAMEEQKAPVGTNYTRVIPTKELNASVMQDFWKKEEAEEKLRQEAEKE 193
            ...|:.:||.. ....|...:|...||||.|.:.....|:.....:.||::.:.||:||:|.|::
Mouse   134 SNGLARLSSPV-LHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERK 197

  Fly   194 SK-----RLELQKLEQEQRSREEKE--HKEREKLVISTTKLQPAHVPIKTSPQPLSPEKTAPGFA 251
            ..     |.|.:::|||::.:||:|  ::|||:.:....:.|          |.|..|       
Mouse   198 KALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQ----------QSLEAE------- 245

  Fly   252 NNLTDAERMRQARNQEARELIG-SRVGAAKAMFTKHTSEGQLQSKLNTQPPAKPARNSIAQRINV 315
                  |..|:.:.|   .:.| .|....::...|..||.:..:.:..|.|..| |....|:..|
Mouse   246 ------EAKRRLKEQ---SIFGDQRDEEEESQMKKSESEVEEAAAIIAQRPDNP-REFFRQQERV 300

  Fly   316 FNQNQPQ-DAPVPSP-------------------PRAASPAKPLPVEAPEPVV------------ 348
            .:.:... |||.|:|                   |.::|.:...|...|.|.:            
Mouse   301 ASASGGSCDAPAPAPFNHRPGRPYCPFIKASDSGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSL 365

  Fly   349 --------------PAPAIAP------AAPVAAEVVSTIAEVEESQPVDDLP------------- 380
                          |.|..:|      :.|:|.::...:.||..|||....|             
Mouse   366 PCSHLDSHRRMAPTPIPTRSPSDSSTASTPIAEQIERALDEVTSSQPPPPPPPPPPTQEAQETTP 430

  Fly   381 -LAHESEQFSTIKRSPH---------------------SKSNSLQSQSPD--------------- 408
             |..|..:.:.:..:|.                     ...:|:.::||:               
Mouse   431 SLDEELSKEAKVTAAPEVWAGCAAEPPQAQEPPLLQSSPLEDSMCTESPEQAALAAPAEPAASVT 495

  Fly   409 -----------ETTSSNETDTAVSQEQEEEVRTKVSV---------TVQQSQSVKSSGMSTLERN 453
                       |||::. |||.::........:.:.:         |:|....|.:.........
Mouse   496 SVADVHAADTIETTTAT-TDTTIANNVTPAAASLIDLWPGNGEEASTLQAEPRVPTPPSGAEASL 559

  Fly   454 ALTDLVNEDDFICQETLGDLGQRARALYDYQAADETEITF-DPGDVI-------------THIDQ 504
            |...|:||   ..||.|..:|:....|.::....|...|| ||.:.:             :.:::
Mouse   560 AEVPLLNE---AAQEPLPPVGEGCANLLNFDELPEPPATFCDPEEEVGETLAASQVLTMPSALEE 621

  Fly   505 IDEGWWQGLGPD 516
            :|:...|.|.|:
Mouse   622 VDQVLEQELEPE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 51/138 (37%)
DBINO <173..>207 CDD:290603 13/38 (34%)
SH3_Abp1_eu 476..529 CDD:212893 10/55 (18%)
Dbn1XP_006517368.1 ADF_drebrin_like 4..139 CDD:200437 50/134 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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