DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and dbn1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_009293890.1 Gene:dbn1 / 561153 ZFINID:ZDB-GENE-091204-284 Length:590 Species:Danio rerio


Alignment Length:604 Identity:151/604 - (25%)
Similarity:248/604 - (41%) Gaps:156/604 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYA 65
            |||:..|||..::.|::||:::.|..:|:|:.||..:|:|.:.|:||||:.|:....::.:|||.
Zfish     1 MAVNLSKNRLALLTAYQDVINETSANDWALYTYEDDSNDLILSASGDGGLAEIAVTFDNTRIMYG 65

  Fly    66 FVRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVS-----NLLSGAHLTINARNEDDIDL 125
            |..::|..:.|.:|:||||.||..|..||..||:|:..::     .|..|..:.:||.:.:|||.
Zfish    66 FCSLKDATSALPRYILINWVGEDVPDARKCACASHVATIAEFFQVGLPKGVDVIVNASSLEDIDP 130

  Fly   126 DRLLKKL--------STVSSAYSFKEPRGAMEEQKAPVGTNYTRV---IPTKELNASVMQDFWKK 179
            ..:.::|        |.|.|....|:     ||....|||.|.:.   |..|::|   .::||::
Zfish   131 SAIGQRLTNGTVPVASPVLSRLKMKD-----EENGEHVGTTYQKTNAEIEMKKIN---REEFWEQ 187

  Fly   180 EEAEEKLRQEAEK----------ESKRLELQKLEQEQRSREEKEHKEREKLVISTTK--LQPAHV 232
            .:.||:.|:|.|:          |::|:||::.|||:|   ||.::|||:.:....|  |:....
Zfish   188 AKREEETRKEEERRKAAEERQRFENERMELERKEQEER---EKRYREREQQIEEHRKKILEEEEA 249

  Fly   233 PIKTSPQPL----SPEKTAPGFANNLTDAERM-----------RQARNQEARELIGS-------- 274
            ..:|..|||    .|....|......::.|..           |:...|..|.:..|        
Zfish   250 KERTRNQPLIVRTEPSCEDPSLEKKESEVEEAAAIIAQRPSNPREFFKQRERAIANSVDISPVMT 314

  Fly   275 -RVGAAKAMFTK--HT-------------------------SEGQLQSKLNTQPPAKPARNSIAQ 311
             |.|...:.|.:  |:                         .||.|:..:.|.....|......:
Zfish   315 HRTGRLDSPFLRQQHSPSDCSPSPSRTPPLSRRQPGPPDDFDEGILERSMTTGCTPIPRIAIQEE 379

  Fly   312 RINVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEP--VVPAPAI----------APAAPVAAEVV 364
            :.:.|.:....|:|..:|.:.:...|..|..:|:|  |.|.|:.          .||..:|....
Zfish   380 KDDFFRKEFGFDSPKQTPVQESGFTKASPSISPQPSSVAPLPSTDESLLDLWDSGPAPAIALSQA 444

  Fly   365 ST-IAEVEESQP---------------VDDLPLA-----HESEQFSTIK-RSPHSKSNSLQ---- 403
            || |.::.|..|               .|::|.|     .|.:..|.:. ..||..:.|.|    
Zfish   445 STHIMDLMEDTPEPHPAGSSPAQPLLSFDEVPDAPYCPGTEDDPSSLVDVAGPHQMTLSYQQALQ 509

  Fly   404 ------SQSPD--------------ETTSSNETDTAVSQE----QEEEVRTKVSVTVQQSQSVKS 444
                  ||..|              |.|.::|...:.|||    |.::...||:.|.........
Zfish   510 HASGSDSQDMDDGQLLLTNGDTLLKEGTQASEGYFSQSQEEDFVQSDDCTAKVNPTPVFYNKPPE 574

  Fly   445 SGMSTLERNALTDLVNEDD 463
            ..::..:    ||.|.|||
Zfish   575 IDITCWD----TDPVMEDD 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 49/147 (33%)
DBINO <173..>207 CDD:290603 14/43 (33%)
SH3_Abp1_eu 476..529 CDD:212893
dbn1XP_009293890.1 ADF_drebrin_like 3..141 CDD:200437 47/137 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25416
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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