DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and dbnlb

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_005167394.1 Gene:dbnlb / 553729 ZFINID:ZDB-GENE-050522-293 Length:476 Species:Danio rerio


Alignment Length:554 Identity:192/554 - (34%)
Similarity:270/554 - (48%) Gaps:102/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYA 65
            |||:..||...:.||:.:|:.:||:|||.||.|||.||::::...||||::|:.|:|||||:||.
Zfish     1 MAVNLSKNGPALTAAYNEVVGEKSETNWVLFTYEGNTNDIRLAEKGDGGLEEMVEELNSGKVMYG 65

  Fly    66 FVRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLK 130
            |.|::||.:||.||:||||.|||....|||.||||:..::|.|.|||:|||||.|:|::.|.:::
Zfish    66 FCRVKDPNSGLPKYVLINWTGEGVKDARKGQCANHVSSMANFLKGAHVTINARAEEDVEPDAVME 130

  Fly   131 KLSTVSSA-YSFKEPRGAMEEQ--KAPVGTNYTRVIPTKELNASVMQDFWKKEEAEEKLRQEAEK 192
            |::..|.| |||.:......:.  :.|||:.|.:.....|:..:....||.:.|.:|:.|.:.||
Zfish   131 KVAKASGANYSFHKETSRFRDSGPQGPVGSVYQKTNAMSEIKKTNKDTFWAQAEKDEEKRLQEEK 195

  Fly   193 ESKRLELQKLEQEQRSREEKEHKEREKLVISTTKLQPAHVPIKTS-PQPLSPEKTAPGFANNLTD 256
            .....|.|:||:|::.||.||.:.|:|    .||.:.:.:..:.. .|....:..|.  ...|.:
Zfish   196 RRAVDERQQLEKERKDREMKEAELRDK----KTKERASQIDEQRKYQQKQDVDNRAQ--QKQLEE 254

  Fly   257 AERMRQARNQ-------------EARELIGSRVGAAKAMFTKHTSEG--QLQSKLNTQPPAKPAR 306
            .|..:||..|             ||..|:..|....:.|| |....|  ...:..|||...||.|
Zfish   255 EEEKKQAAQQKPFYRGESVEKANEAAALVSQRSVNPREMF-KQREMGINPTNTDSNTQSSPKPGR 318

  Fly   307 -NSIAQRINVFNQNQPQD-APVPSPPRAASPAKPLPVEAPEPVVPAPAIAPAAPVAAEVVSTIAE 369
             ||      .|...|..| .|..||.|.|||.:.......|        .|.:..........||
Zfish   319 LNS------PFLSKQSCDPEPFRSPVRQASPLRAAVASFEE--------QPRSQYVEAEAEAEAE 369

  Fly   370 VEESQPVDD---LPLAHESEQFSTIKRSPHSKSNSLQSQSPDETTSSNETDTAVSQEQEEEVRTK 431
            .|:.|.|.|   .|:..:..|:..:             :.|| ....|.|       |.||..| 
Zfish   370 YEDVQVVSDKYEAPVEQQQPQYEAV-------------EEPD-AVYENPT-------QVEEQST- 412

  Fly   432 VSVTVQQSQSVKSSGMSTLERNALTDLVNEDDFICQETLGDLGQRARALYDYQAADETEITFDPG 496
                                               .|.:.:.|..|||||||||||:|||:|||.
Zfish   413 -----------------------------------YEPVDERGVCARALYDYQAADDTEISFDPD 442

  Fly   497 DVITHIDQIDEGWWQGLGPDGTYGLFPANYVEII 530
            |:||.|:.||||||:|.||||.:|:|||||||::
Zfish   443 DIITSIEMIDEGWWRGYGPDGHFGMFPANYVELL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 68/134 (51%)
DBINO <173..>207 CDD:290603 12/33 (36%)
SH3_Abp1_eu 476..529 CDD:212893 39/52 (75%)
dbnlbXP_005167394.1 ADF_drebrin_like 3..138 CDD:200437 68/134 (51%)
RILP-like 182..>243 CDD:304877 19/64 (30%)
SH3_Abp1_eu 422..475 CDD:212893 39/52 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4320
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8468
Inparanoid 1 1.050 278 1.000 Inparanoid score I2897
OMA 1 1.010 - - QHG55870
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 1 1.000 - - FOG0004274
OrthoInspector 1 1.000 - - otm25416
orthoMCL 1 0.900 - - OOG6_104762
Panther 1 1.100 - - LDO PTHR10829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R73
SonicParanoid 1 1.000 - - X2518
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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