DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and cotl1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_956306.1 Gene:cotl1 / 336381 ZFINID:ZDB-GENE-030131-8325 Length:142 Species:Danio rerio


Alignment Length:169 Identity:40/169 - (23%)
Similarity:60/169 - (35%) Gaps:42/169 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGG-VDELNEDLNSGKIMY 64
            ||...:|...:  .|:..|.||.|...|:.|.|:|.|    :|..|.|. .:|..........::
Zfish     1 MATRIDKEACR--EAYNLVRDDSSGICWACFKYDGST----IVPGGHGSDYEEFKSQCTVDSRVF 59

  Fly    65 AFVRI--EDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDR 127
            .||||  .|..:..:|:..|.|.||....|::.                          .|..|:
Zfish    60 GFVRIMTGDAMSKRSKFTFITWIGENITGLQRA--------------------------KISTDK 98

  Fly   128 LLKK--LSTVSSAYSFKEPRGAMEEQ-----KAPVGTNY 159
            .|.|  :.|.:..:...:|:...||.     |...|.||
Zfish    99 ALVKDAVPTFAKEFMISDPKELEEEYLRTELKKAGGANY 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 31/139 (22%)
DBINO <173..>207 CDD:290603
SH3_Abp1_eu 476..529 CDD:212893
cotl1NP_956306.1 ADF_coactosin_like 9..120 CDD:200438 31/142 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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