DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and CTTN

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001171669.1 Gene:CTTN / 2017 HGNCID:3338 Length:634 Species:Homo sapiens


Alignment Length:549 Identity:119/549 - (21%)
Similarity:184/549 - (33%) Gaps:225/549 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVSFE-KNRAQIVAAWKD----------VLDDKSDTNWSLFGYEGQTNE---LKVVATGDGGVDE 52
            ||.|| :.:.:..|:.||          |..|:.|.:...|.|:|:|.:   .:..:.|.||...
Human   136 AVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQGKTEKHESQRDYSKGFGGKYG 200

  Fly    53 LNEDLNSGKIMYAFVRIE----DPKTGLNKYLLINWQGE-GAPVLRKGTCA---NH--------- 100
            :::|    |:..:.|..|    ..|....|..:..:.|: |....|:..||   :|         
Human   201 IDKD----KVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHES 261

  Fly   101 IRDVSNLLSGAHLTINARNEDDIDLDRLLKKLST------VSSAYSFKEPRGAMEEQKAPVGTNY 159
            .:|.|....|.:         .:..||:.|..||      |||||....|..|:..:.:.:..|:
Human   262 QKDYSKGFGGKY---------GVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANF 317

  Fly   160 TRVIPTKELNASVMQDFWKKEEAEEKLRQEAEKESKRLELQKLEQEQRSREEKEHKEREKLVIST 224
                                    |.|.:|.|:|.:|    |.|.|:..|..||.:|:|      
Human   318 ------------------------ENLAKEKEQEDRR----KAEAERAQRMAKERQEQE------ 348

  Fly   225 TKLQPAHVPIKTSPQPLSPEKTAPGFANNLTDAERMRQARNQEARELIGSRVGAAKAMFTKHTSE 289
                                                      |||..:                |
Human   349 ------------------------------------------EARRKL----------------E 355

  Fly   290 GQLQSKLNTQPPAKPARNSIAQRINVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEPVVPAPAIA 354
            .|.::|..| ||..|                   ||.|:..|                      .
Human   356 EQARAKTQT-PPVSP-------------------APQPTEER----------------------L 378

  Fly   355 PAAPVAAEVVSTIAEVEESQPVDDLPLAHESEQFSTIKRSPHSKSNSLQSQSPDETTSSNETDTA 419
            |::||..:..|..||:....||.    ..|.|...:::.:.:.:::|.|.             .|
Human   379 PSSPVYEDAASFKAELSYRGPVS----GTEPEPVYSMEAADYREASSQQG-------------LA 426

  Fly   420 VSQEQEEEVRTKVSVTVQQSQSVKSSGMSTLERNALTDLVNEDDFICQETLGDLGQRARALYDYQ 484
            .:.|...|             |.::.|....|.:...:..|           |||..|.||||||
Human   427 YATEAVYE-------------SAEAPGHYPAEDSTYDEYEN-----------DLGITAVALYDYQ 467

  Fly   485 AADETEITFDPGDVITHIDQIDEGWWQGL 513
            ||.:.||:|||.|:||:|:.||:|||:|:
Human   468 AAGDDEISFDPDDIITNIEMIDDGWWRGV 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 38/171 (22%)
DBINO <173..>207 CDD:290603 9/33 (27%)
SH3_Abp1_eu 476..529 CDD:212893 24/38 (63%)
CTTNNP_001171669.1 HS1_rep 83..116 CDD:280396
HS1_rep 120..155 CDD:280396 7/18 (39%)
HS1_rep 157..192 CDD:280396 7/34 (21%)
HS1_rep 194..228 CDD:280396 9/37 (24%)
HS1_rep 231..266 CDD:280396 7/34 (21%)
HS1_rep 268..>294 CDD:280396 6/34 (18%)
TAF4 <288..>363 CDD:296797 28/166 (17%)
SH3 459..>501 CDD:302595 24/38 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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