DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and dbn-1

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_499840.1 Gene:dbn-1 / 176813 WormBaseID:WBGene00010664 Length:643 Species:Caenorhabditis elegans


Alignment Length:678 Identity:173/678 - (25%)
Similarity:265/678 - (39%) Gaps:183/678 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYA 65
            |.:::..:..:|.|:::...||.....|.:|.|||.:|.|:|...|.||::|..:..:|||:.:.
 Worm     1 MTLNYHAHGKEIEASYRRASDDSDGDKWVIFDYEGNSNTLRVKEEGTGGLEEFADSFSSGKLQFG 65

  Fly    66 FVRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANHIRDVSNLLSGAHLTINARNEDDIDLDRLLK 130
            .:.:........|.:|::|||||.|.||..:...|..:....|...|:.::||:|.||:.|.:.|
 Worm    66 VISVRLSSDVFPKIVLVHWQGEGVPTLRLASTTPHAEEFRRFLKTVHIVLHARSEIDIEPDAIRK 130

  Fly   131 KL---------STVSSAYSFKE-------PRGAMEE----------------------------- 150
            ::         :.|.|.||..|       |..|..|                             
 Worm   131 EVRKLPAANANAIVESTYSMPEKVNSVYQPTNAHSELSSEARENFWSTTNQEEKRRQADEKVAHA 195

  Fly   151 ------------------------QKAPVGTNYTRVIPTKELNASVMQDFWKKEEAEEKLRQEAE 191
                                    |...|.:.|....|..||.....::||.|...|||||||.|
 Worm   196 KQQKQYEADRDRTAAAIHTKAEDFQPEKVNSVYKPTKPHVELKTVKREEFWSKMNEEEKLRQEEE 260

  Fly   192 KESKRLELQKLEQEQRSREEKEHKEREKL----VISTTKLQPAHVPIKTSPQPLSPEKTAPGFAN 252
            |.::....::.|.:::....:.|.:.|..    |.|..|....||.|.:|.:        ..|.:
 Worm   261 KTAREQAHKQFEADRQRMASEIHSKTENYQPDKVTSVYKPTKPHVEISSSAR--------EEFWS 317

  Fly   253 NLTDAERMRQARNQEA-----RELIGSRVGAAKAMFTK-HTSEGQLQSKLNTQP-PA-KPARNSI 309
            .:.:.|:.|||..:||     :|....|...|..:..| ..|:..:.|.:|..| || .|:...:
 Worm   318 KMNEEEQRRQAEEKEAQAQKQKEFETDRKRIADDLHGKAQISDKPVPSSVNPAPAPAPTPSAGLV 382

  Fly   310 AQRINVFNQNQPQDAPVPSPPRAASPAK---------------------------PLPVE-APEP 346
            ..|..:|: ::|....:|.|....||.|                           |.|:. .|||
 Worm   383 GSRKELFS-SKPSGPVLPKPQVNGSPKKWPPVGTTSPPREPVNRLTEPDEPSTYTPKPIAYEPEP 446

  Fly   347 VV-----------------------------PAPAIAPAAPVAAEVVSTIAEVEESQPVDDLPLA 382
            :|                             |.|.|||..|......|..|...::.||      
 Worm   447 MVYKPEAMKPAVSYDAYEEPPAEPAPPTFLAPTPVIAPPPPEPTPAPSHYASQYDAPPV------ 505

  Fly   383 HESEQ--FSTIKRSPHSKSNSLQSQSPDETTSSNETDTAV-----SQEQEEEVRTKVSVTVQQSQ 440
            |||.:  ...:....|..|   |..:|.|...|:.:.:.:     ||.....|..:..|...:|.
 Worm   506 HESFEPAVPPVSAPSHYAS---QYDAPPEPIDSHSSSSQLPAHIASQYDMPPVMPEEPVFAPKSS 567

  Fly   441 SVKSSGMSTLERNALTDLVNEDDF---ICQETLGDLGQRARALYDYQAADETEITFDPGDVITHI 502
            .:|.:...          :::.||   :.:       |.|.||:||||||:|||:|||.|:||.|
 Worm   568 PIKVAAPP----------IDQYDFPPAVAE-------QNAMALWDYQAADDTEISFDPDDIITDI 615

  Fly   503 DQIDEGWWQGLGPDGTYGLFPANYVEII 530
            ||:|.|||:|..|.|..||||||||::|
 Worm   616 DQVDSGWWKGRAPSGRVGLFPANYVKLI 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 40/143 (28%)
DBINO <173..>207 CDD:290603 13/33 (39%)
SH3_Abp1_eu 476..529 CDD:212893 36/52 (69%)
dbn-1NP_499840.1 ADF_drebrin_like 3..138 CDD:200437 39/134 (29%)
SH3 589..642 CDD:302595 36/52 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166559
Domainoid 1 1.000 84 1.000 Domainoid score I5304
eggNOG 1 0.900 - - E1_KOG3655
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8468
Inparanoid 1 1.050 123 1.000 Inparanoid score I3311
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55870
OrthoDB 1 1.010 - - D535221at33208
OrthoFinder 1 1.000 - - FOG0004274
OrthoInspector 1 1.000 - - oto20651
orthoMCL 1 0.900 - - OOG6_104762
Panther 1 1.100 - - LDO PTHR10829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R73
SonicParanoid 1 1.000 - - X2518
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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