DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abp1 and Cttn

DIOPT Version :9

Sequence 1:NP_648657.1 Gene:Abp1 / 39520 FlyBaseID:FBgn0036372 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_031829.2 Gene:Cttn / 13043 MGIID:99695 Length:546 Species:Mus musculus


Alignment Length:578 Identity:130/578 - (22%)
Similarity:201/578 - (34%) Gaps:219/578 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVSFE-KNRAQIVAAWKD----------VLDDKSDTNWSLFGYEGQTNE---LKVVATGDGGVDE 52
            ||.|| :.:.:..|:.||          |..|:.|.:...|.|:|:|.:   .|..:.|.||...
Mouse   136 AVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQGKTEKHESQKDYSKGFGGKYG 200

  Fly    53 LNEDLNSGKIMYAFVRIE----DPKTGLNKYLLINWQGE-GAPVLRKGTCA---NHIRDVSNLLS 109
            :::|    |:..:.|..|    ..|....|..:..:.|: |....|:..||   :|...:....|
Mouse   201 IDKD----KVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHES 261

  Fly   110 --------GAHLTINARNEDDIDL-----DRLLKKLSTVSSAYSFKEPRGAME----------EQ 151
                    |....:.:..:|...:     :||.|..|....|..|....|..:          |:
Mouse   262 QKDYKTGFGGKFGVQSERQDSSAVGFDYKERLAKHESQQDYAKGFGGKYGVQKDRMDKNASTFEE 326

  Fly   152 KAPVGTNYTRVIPTKEL---NASVMQDFWKKEEAEEKLRQEAEKESKRLELQKLEQEQRSREEKE 213
            ...|.:.|.:.:|.:.:   .:::..:|       |.|.:|.|:|.:|    |.|.|:..|..||
Mouse   327 VVQVPSAYQKTVPIEAVTSKTSNIRANF-------ENLAKEREQEDRR----KAEAERAQRMAKE 380

  Fly   214 HKEREKLVISTTKLQPAHVPIKTSPQPLSPEKTAPGFANNLTDAERMRQARNQEARELIGSRVGA 278
            .:|:|                                                |||..:      
Mouse   381 RQEQE------------------------------------------------EARRKL------ 391

  Fly   279 AKAMFTKHTSEGQLQSKLNTQPPAKPARNSIAQRINVFNQNQPQDAPV--PSPPRAASPAKPLPV 341
                      |.|.::|..| |||.|:...|        :::|..:|:  .:.|..|.|:.....
Mouse   392 ----------EEQARAKKQT-PPASPSPQPI--------EDRPPSSPIYEDAAPFKAEPSYRGSE 437

  Fly   342 EAPEPVVPAPAIAPAAPVAAEVVSTIAEVEESQPVDDLPLAHESEQFSTIKRSPHSKSNSLQSQS 406
            ..||..:.|..| |.|.....:..|      |:||           :.|.:...|       .|:
Mouse   438 PEPEYSIEAAGI-PEAGSQQGLTYT------SEPV-----------YETTEAPGH-------YQA 477

  Fly   407 PDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTLERNALTDLVNEDDFICQETLG 471
            .|:|....|:                                                       
Mouse   478 EDDTYDGYES------------------------------------------------------- 487

  Fly   472 DLGQRARALYDYQAADETEITFDPGDVITHIDQIDEGWWQGLGPDGTYGLFPANYVEI 529
            |||..|.||||||||.:.||:|||.|:||:|:.||:|||:|: ..|.||||||||||:
Mouse   488 DLGITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGV-CKGRYGLFPANYVEL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abp1NP_648657.1 ADF_drebrin_like 3..138 CDD:200437 36/169 (21%)
DBINO <173..>207 CDD:290603 10/33 (30%)
SH3_Abp1_eu 476..529 CDD:212893 34/52 (65%)
CttnNP_031829.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Cortactin 1 80..116
HS1_rep 83..116 CDD:280396
Cortactin 2 117..153 5/16 (31%)
HS1_rep 120..155 CDD:280396 7/18 (39%)
Cortactin 3 154..190 7/35 (20%)
HS1_rep 157..192 CDD:280396 8/34 (24%)
Cortactin 4 191..227 8/39 (21%)
HS1_rep 194..228 CDD:280396 9/37 (24%)
Cortactin 5 228..264 7/35 (20%)
HS1_rep 231..266 CDD:280396 7/34 (21%)
Cortactin 6 265..301 6/35 (17%)
HS1_rep 268..303 CDD:280396 6/34 (18%)
Cortactin 7, truncated 302..324 3/21 (14%)
HS1_rep 305..>330 CDD:280396 3/24 (13%)
TAF4 <336..>399 CDD:296797 21/137 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..424 28/145 (19%)
SH3_Cortactin 492..544 CDD:212892 34/52 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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