DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stv and bag3

DIOPT Version :9

Sequence 1:NP_001097600.1 Gene:stv / 39518 FlyBaseID:FBgn0086708 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001003533.1 Gene:bag3 / 445139 ZFINID:ZDB-GENE-040801-40 Length:459 Species:Danio rerio


Alignment Length:522 Identity:121/522 - (23%)
Similarity:176/522 - (33%) Gaps:197/522 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 DDDFPSYFD---DPDFGFPRFSTMGRRGR------------MAGGANTHMDHDDDFFNRLPSEFR 183
            :|..|..::   ||..|:|.|.....|..            .:.|.:...:...|......:|.|
Zfish     4 NDPLPPGWEIKIDPQTGWPFFVDHNNRTTTWNDPRHDTKKIFSNGPSMSPETPQDMHKTFINEMR 68

  Fly   184 Q------YIPDGFGGRRGTGAAPAPGQVPQ-QQQPQPQPQYTQQQPQTHFQFGVPPQQQ------ 235
            |      |||                 :|. .:.|:|:   .||.|.  |.:..|..||      
Zfish    69 QPMLRQGYIP-----------------IPVCHENPEPR---LQQYPS--FSYIHPAVQQNLRTDG 111

  Fly   236 ----PVYAGPTQQQVP-QTPSKRLCDAAIQTEDPAGRSEVDCAPPTNLNQHGLRNTVDMGVKSVA 295
                |..|...:.:.| ||||: .|.:              |:|    ..||             
Zfish   112 RTPSPTPAAHCRPRSPVQTPSE-ACSS--------------CSP----TSHG------------- 144

  Fly   296 EQDQGLRSHSAPPPEQQQQNLQYHQQQQQHQQ-PGVHSQPFGTQTSPPVQGQQFKTYYAP----- 354
                         ||.       :|.|..||| .|:|.||..:.|.       .:..|.|     
Zfish   145 -------------PEG-------YQPQGTHQQISGLHQQPRSSNTG-------LRAGYIPIPVIH 182

  Fly   355 -----------HQQTHPQQ----KQQTP--------------PPAPQTP---------------- 374
                       .|.:||.:    ::|.|              |...|:|                
Zfish   183 EGAGGVLPSQLSQSSHPTREKIYREQVPIQIQQNRAASPIQVPLRAQSPVMAQIMGERPQMQQHI 247

  Fly   375 GGTYVRTIPIFVEGRSEPIINAHK-EIPNQNAPPSAQ------AQAQAQAYAQAQPQAHAAPQQH 432
            |.|   .||..:|...|.||.... |:|.|......|      .|.|.|...|.||:|..:||. 
Zfish   248 GHT---AIPSKIEHPVEEIIRVPTFEVPIQRVSEVPQQIHHQPVQQQQQPTQQPQPKAQPSPQV- 308

  Fly   433 NRPTPLNTQAQPEQQVPVEGAAGLPPQTPHTLNS-----------------INKIQDIQRDVLEL 480
            :..:.:..|..|..: |.|.||   ||||..:.|                 :.|:|.|...|.:|
Zfish   309 SETSNITIQVPPAPE-PQETAA---PQTPQEVPSSQLQPEETLEQDLSHPGLVKVQQIVERVEKL 369

  Fly   481 MGKVEQFKGTREEKEYAYLDEMLTRNLLKLDTIDTNGKDSIRLARKEAIKCIQASINVLEAKAEE 545
            ...|:.|.|.:.:|.|..|:||||:.||.||::|..|:..:|.||::.::.:|..::.||...|.
Zfish   370 AQNVKGFDGKKNDKRYLVLEEMLTKELLALDSVDPEGRPDVRQARRDGVRRVQNILDELEMIGEM 434

  Fly   546 NA 547
            .|
Zfish   435 QA 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stvNP_001097600.1 BAG 470..541 CDD:280360 25/70 (36%)
bag3NP_001003533.1 WW 6..38 CDD:197736 7/31 (23%)
BAG 358..432 CDD:214591 27/73 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594610
Domainoid 1 1.000 56 1.000 Domainoid score I10988
eggNOG 1 0.900 - - E1_KOG4361
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25259
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12329
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7026
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.960

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