DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stv and Bag4

DIOPT Version :9

Sequence 1:NP_001097600.1 Gene:stv / 39518 FlyBaseID:FBgn0086708 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001020301.1 Gene:Bag4 / 361167 RGDID:1560875 Length:457 Species:Rattus norvegicus


Alignment Length:514 Identity:118/514 - (22%)
Similarity:178/514 - (34%) Gaps:149/514 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AGFG--DSRKRSSLHGPSG---QVHADDDFPSYFD-DPDFGFPRFSTMGR---------RGRMAG 162
            :|:|  |.......:||.|   .||...  |.|.. .|:...|..|..||         .|..||
  Rat     7 SGYGPSDGPSYGRYYGPGGGDVPVHVPP--PLYHPLRPEPPQPPVSWRGRGGAPAETTWPGEGAG 69

  Fly   163 GANTHMDHDDDFFNRLPSEFRQYIPDGFGGRRGTGAAPAPGQVPQQQQPQPQPQYTQQQPQTHFQ 227
            |..                   |.|.|     |..|.|:......|:|| |.|.|     .:::.
  Rat    70 GDG-------------------YYPSG-----GAWAEPSRAGGGHQEQP-PYPGY-----NSNYW 104

  Fly   228 FGVPPQQQPVYAGPTQQQVPQTPSKRLCDAAIQTEDPAGRSEVDCAPPTNLNQHGLRNTVDMGVK 292
            ..|.|:.......|.:.::.........:.|.....|.|.:....|..:             |..
  Rat   105 NSVRPRAPYPSTYPMRPELQGQSLNSYANGAYGPPYPPGPATASAASYS-------------GAY 156

  Fly   293 SVAEQDQGLRSHSAPPPEQQQQNLQYHQQQQQHQQPGVHSQPFGTQTSPPVQGQ-------QFKT 350
            .|....||..|...|...:...|......:..:.|....::      :||::||       |...
  Rat   157 YVPGYAQGTYSTDIPSTYRSPGNSPTPVSRWMYPQQDCPTE------APPLRGQVPGYPASQNPA 215

  Fly   351 YYAPH------QQTHPQQ--------------------KQQTPPPAPQTPGGTYVRTIPIFVEGR 389
            ...||      .:|.||.                    :...|..||..|.|....|     |..
  Rat   216 MTLPHYPYGDGNRTVPQSGATGRPQDDAWASSAYGMGARYPWPSAAPSAPSGNLYMT-----ESA 275

  Fly   390 SEPIINAHKEIPNQNAPPSAQAQAQAQAYAQAQP--QAHAAP---QQHNRPTPLN--------TQ 441
            |....|:..:.|  .:||..|.:..:.:|:|:..  ..|:.|   :|:..|..:|        :|
  Rat   276 SPWPGNSSPQPP--PSPPPQQPKDSSYSYSQSGQGMNRHSFPCSVRQYESPGAVNNDESDLLDSQ 338

  Fly   442 AQ---------------PEQQVP--------VEGAAGLPPQTPHTLNSINKIQDIQRDVLELMGK 483
            .|               |..|||        .....|.||.....::.:.|:|.::::       
  Rat   339 VQYSAEPQLYGNTSSEHPSNQVPSNNLPEECFSSDEGTPPSIKKIIHVLEKVQYLEQE------- 396

  Fly   484 VEQFKGTREEKEYAYLDEMLTRNLLKLDTIDTNGKDSIRLARKEAIKCIQASINVLEAK 542
            ||:|.|.:.:|.|..|:||||:.||:||:::|.|:||:|.|||||:..|||.:..||.|
  Rat   397 VEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQAILEKLEKK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stvNP_001097600.1 BAG 470..541 CDD:280360 30/70 (43%)
Bag4NP_001020301.1 BAG 379..456 CDD:214591 33/84 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10421
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008312
OrthoInspector 1 1.000 - - otm44665
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12329
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.100

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