DRSC/TRiP Functional Genomics Resources

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Protein Alignment stv and bag4

DIOPT Version :9

Sequence 1:NP_001097600.1 Gene:stv / 39518 FlyBaseID:FBgn0086708 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001243658.1 Gene:bag4 / 100001980 ZFINID:ZDB-GENE-030131-5484 Length:399 Species:Danio rerio


Alignment Length:446 Identity:115/446 - (25%)
Similarity:157/446 - (35%) Gaps:141/446 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 DGFGGRRGTGAAPAPGQVPQQQQPQ---PQP-QYTQQQPQTHFQFGVPPQQQPVYAGPTQQQVPQ 248
            |..|..||.|  .|...:.||.||:   |.| .|..:....::..|:..|    |.|.:....||
Zfish     4 DSAGSDRGRG--EASWIMHQQMQPETKSPWPSSYKSENNNVNWNNGMESQ----YPGYSSYWYPQ 62

  Fly   249 TPSKRLCDAAIQTEDPAGRSEVDCAPPTNLNQHGLRNTVDMGVKSVAEQDQGLRSHSAPPPEQQQ 313
            :          .|..|.|.|   ..|.|.:|.....|...|........:.|..|.|...|    
Zfish    63 S----------HTAGPYGSS---YPPGTEVNGQASYNPQAMPAYPNGVYNPGQYSTSMLHP---- 110

  Fly   314 QNLQYHQQQQQHQQPGVHSQP-----FGTQTSPPVQGQQFKTYYAPHQQTHPQQKQQTPPPAPQT 373
            .|..|...|...:||..|:|.     .|..|.||        |..||.|.           ||..
Zfish   111 SNPFYCSDQVPSRQPHYHNQSCPEQNAGGSTHPP--------YPVPHCQA-----------APGY 156

  Fly   374 PGGTYVRTIPIFVEGRSEPIINAHKEIPNQN---APPSAQAQAQAQAYAQAQPQ----------- 424
            |.|:|    |.:.||..:   ||  ..|||.   :.|..:|.:..|.|....||           
Zfish   157 PAGSY----PHYPEGCPQ---NA--PYPNQQPVLSRPQHEAWSHTQGYGPTLPQQQWPSDSQTPH 212

  Fly   425 ---------AHAAPQQHNRPTPLN-----TQAQPEQQ-----------VPVEGAAGLPPQ----- 459
                     .|..|.|...|.|..     .|:||..|           |....::.|||:     
Zfish   213 SHYGSHVRPPHPPPWQGPAPPPYEHKDPPYQSQPHMQPKNQPAGSRPRVSTPNSSALPPKPTQFS 277

  Fly   460 ----------------------------------TPHTL---NSINKIQDIQRDVLELMGKVEQF 487
                                              .|..|   :|:.::|.|...|..|...|::|
Zfish   278 SPPQIYKTSSGVGGLEPKPAQNEQPPMSSPPASSMPAPLKDNSSLARVQQILARVQLLQEDVDEF 342

  Fly   488 KGTREEKEYAYLDEMLTRNLLKLDTIDTNGKDSIRLARKEAIKCIQASINVLEAKA 543
            .|.:.:|.|..|:|:||:.||:||:::|.|:|.:|.|||||::.|||.:..||.||
Zfish   343 VGKKTDKSYRCLEELLTKELLELDSVETYGQDVVRQARKEAVRRIQAILECLEKKA 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stvNP_001097600.1 BAG 470..541 CDD:280360 30/70 (43%)
bag4NP_001243658.1 BAG 321..398 CDD:214591 32/76 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594611
Domainoid 1 1.000 56 1.000 Domainoid score I10988
eggNOG 1 0.900 - - E1_KOG4361
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008312
OrthoInspector 1 1.000 - - otm25259
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12329
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7026
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.960

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