DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10089 and ssh1b

DIOPT Version :9

Sequence 1:NP_001261803.1 Gene:CG10089 / 39517 FlyBaseID:FBgn0036369 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_021332184.1 Gene:ssh1b / 567479 ZFINID:ZDB-GENE-030131-5909 Length:962 Species:Danio rerio


Alignment Length:487 Identity:106/487 - (21%)
Similarity:176/487 - (36%) Gaps:134/487 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYVGNYRDSKDHAQLERFKISHIIAIHDSPRRLLPDKHYLC-VMASDTPDQNLSQYFSVCNDFIH 75
            ||:|:..::.:..:|:...:.:|:.:........|.....| |...|....:|..:::...:||.
Zfish   315 LYLGSEWNASNLEELQDSGVGYILNVTREIDNFFPGTFCYCNVRVYDDETTDLLAHWNETYNFIV 379

  Fly    76 AARLREGNVLIHCLAGMSRSVTVAVAYIMTATHLNWKEALKVVRAGRAVANPNAGFQSQLQEFEQ 140
            .|:..:...|:||..|:|||.:..:||.|.....:.::|...|:..|.:|.||..|..||.|:|.
Zfish   380 RAKKNDSKCLVHCKMGVSRSASTVIAYAMKEYGWSLEKAYNFVKQKRNIAQPNPAFMKQLAEYEG 444

  Fly   141 FKLSEERRRLR-----------ERFPSSALEQLDRTKVATALDNYQELLQNRDICEGNCSRGEKC 194
            ...:.::|..:           |...:||... |:|...:.|...||        |.....|...
Zfish   445 ILDASKQRHNKLWKPDGDEYSPEGLQASAASG-DQTPQFSLLHPDQE--------ERAWGHGGAS 500

  Fly   195 PTGVCNMDPTKGL-----FRRRPSNASTHSRLRAQSSNANASSSSLSVSSAAAQSCPTSPKNSPL 254
            .:..|..:||..|     |||                          :|..|..|.|::|...| 
Zfish   501 ASPCCGEEPTDHLNYNYYFRR--------------------------LSDTALDSEPSTPVRGP- 538

  Fly   255 PIVRRSVGNERI------PEDEIVLE------------------------QPPTTSREAAEYAAA 289
            |:    :|.||:      .|.:.:|:                        :|....|...|::..
Zfish   539 PL----LGMERVFIEIEDVERDALLDDEGFPMAHLGLPGEGTAAQTCGRLEPLEDMRLRLEFSTV 599

  Fly   290 FEDARREQEQRQLQQQQQLSRSQRSPRPVNSSREAPRVSSAGSRRESAAREGNGSAQLQRSASTV 354
             |:...|:.|::..:...|:|.:.:||...|...:.|.::     |:|    |.|.:|....|..
Zfish   600 -EEEDEEEAQKEEAEMAALARGEETPREDESLANSNRFNN-----ENA----NNSNRLAGKRSCP 654

  Fly   355 SGFG----------VRPRSSPAGLHAYTG-----SVPSSVHGSRVDLRDADKGSAIYLGCSAPRA 404
            |||.          |:|        :|..     .:||   |.|.:.|:.        ..:.||.
Zfish   655 SGFDDSASIGNPFKVKP--------SYQSCRDCLRLPS---GRRCERRNH--------RLNLPRH 700

  Fly   405 STLSISSSRGSSGG--SAPPSPCHTPPASPRH 434
            :.|. |.|..:.||  ..|.|....||..|.|
Zfish   701 TGLP-SISIQAPGGLKFRPVSINKVPPPVPLH 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10089NP_001261803.1 DSPc 4..139 CDD:238073 33/127 (26%)
ssh1bXP_021332184.1 SSH-N 3..236 CDD:212166
DEK_C 244..302 CDD:312337
DSPc 307..443 CDD:238073 33/127 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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