DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10738 and GLUR2

DIOPT Version :10

Sequence 1:NP_729905.2 Gene:CG10738 / 39516 FlyBaseID:FBgn0036368 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_567981.1 Gene:GLUR2 / 829682 AraportID:AT4G35290 Length:912 Species:Arabidopsis thaliana


Alignment Length:527 Identity:104/527 - (19%)
Similarity:193/527 - (36%) Gaps:142/527 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LLLLLFLLAF--------SNFRPTH---GEVFTLGYLTASQRRPGNLDYNRPGLTISGAISLAVE 74
            |:||.|::..        :..||.:   |.:|:||.|              .|...:.|:..|.|
plant     5 LVLLSFIVLIGDGMISEGAGLRPRYVDVGAIFSLGTL--------------QGEVTNIAMKAAEE 55

  Fly    75 EVNAGRLRDRGHSLQFVVAETYGEEVVSIRQTAALWTQQVAAYIGPQETCVHE--GRMAAAFNLP 137
            :||:......|..|:....:......::|............|.||||.:.:..  ..:|...::|
plant    56 DVNSDPSFLGGSKLRITTYDAKRNGFLTIMGALQFMETDAVAIIGPQTSIMAHVLSHLANELSVP 120

  Fly   138 MISYYCTHRDPSNKA-DFPTFARTRPPDTQISKSVVALLLAFNWTQVSFLYLDDASGQYQPVAET 201
            |:|:  |..|||..| .||.|.:|.|.|..:.:::..::..:.|::|..||.||.:.:       
plant   121 MLSF--TALDPSLSALQFPFFVQTAPSDLFLMRAIAEMISYYGWSEVIALYNDDDNSR------- 176

  Fly   202 ILSTLTDAG---------VSIRDIRTWNTIYHHGFMDNPFE---ALVEQTYANTRIYLILGHYYE 254
              :.:|..|         :|.:.:...:.:     :.:|.|   .||:.....:|:.::  :.:.
plant   177 --NGITALGDELEGRRCKISYKAVLPLDVV-----ITSPREIINELVKIQGMESRVIIV--NTFP 232

  Fly   255 HVG--LMVSLQRRGILSKGDYFVVGIDIEQYDPAKPEKYLRGLLLEDVEPLAVQAFQSYLGIVPT 317
            ..|  :....|:.|::.||..::....:..             ||:.|.||..:..:|..|::..
plant   233 KTGKKIFEEAQKLGMMEKGYVWIATTWLTS-------------LLDSVNPLPAKTAESLRGVLTL 284

  Fly   318 A-----SVSFATFANEVNKYMERPPFNFPNPLGPFGGVKQISAEAAYLYDAVHLYAKALMEVLDS 377
            .     |.....|....||..              .|...::....|.||.|.:.|:|:..:|||
plant   285 RIHTPNSKKKKDFVARWNKLS--------------NGTVGLNVYGLYAYDTVWIIARAVKRLLDS 335

  Fly   378 ----------------GGRPRNGSAIVAAIKGSRY---------RSAMGYHVYIDENGDAAGNYT 417
                            ||...|..|:....:||::         ....|...::.:......:|.
plant   336 RANISFSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYD 400

  Fly   418 VLARGSVRNGRNQTVLGLRPVGTFIHRNSSLSSI----------SKALPHQNLKLFSPIDWVGGT 472
            ::         |....|.|.:| :...:|.||.|          :::..:|:|   :.:.|.|||
plant   401 II---------NVVDDGFRQIG-YWSNHSGLSIIPPESLYKKLSNRSSSNQHL---NNVTWPGGT 452

  Fly   473 RPAAAPR 479
              :..||
plant   453 --SETPR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10738NP_729905.2 PBP1_SAP_GC-like 41..441 CDD:380593 85/446 (19%)
PK_GC-A_B 570..853 CDD:270944
HNOBA <860..907 CDD:462234
CYCc 886..1078 CDD:214485
GLUR2NP_567981.1 PBP1_GABAb_receptor_plant 31..422 CDD:380645 87/459 (19%)
GluR_Plant 466..804 CDD:270404
Lig_chan 587..838 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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