DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10738 and GLR2

DIOPT Version :10

Sequence 1:NP_729905.2 Gene:CG10738 / 39516 FlyBaseID:FBgn0036368 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_001318239.1 Gene:GLR2 / 816231 AraportID:AT2G17260 Length:925 Species:Arabidopsis thaliana


Alignment Length:521 Identity:103/521 - (19%)
Similarity:191/521 - (36%) Gaps:132/521 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLLLFLLAFSNFRPTHGEVFTLGYLTASQRRPG----------NLDYNRPGLTISGAISLAVEEV 76
            :||.|::....     |.:.:.|   ||..||.          |..|   |.|.:.|...|.|:|
plant     8 VLLSFIIVLGG-----GLLLSEG---ASSSRPPVIKVGAIFGLNTMY---GETANIAFKAAEEDV 61

  Fly    77 NAGRLRDRGHSLQFVVAETYGEEVVSIRQTAALWTQQVAAYIGPQETCVHE--GRMAAAFNLPMI 139
            |:......|..|:.::.:......:||..........|.|.||||.:.:..  ..:|....:||:
plant    62 NSDPSFLGGSKLRILMNDAKRSGFLSIMGALQFMETDVVAIIGPQTSIMAHVLSHLANELTVPML 126

  Fly   140 SYYCTHRDPS-NKADFPTFARTRPPDTQISKSVVALLLAFNWTQVSFLYLDDASGQYQPVAETIL 203
            |:  |..||: :...||.|.:|.|.|..:.:::..::..:.|:.|..||.||.:.:         
plant   127 SF--TALDPTLSPLQFPFFVQTAPSDLFLMRAIAEMITYYGWSDVVALYNDDDNSR--------- 180

  Fly   204 STLTDAG---------VSIRDIRTWNTIYHHGFMDNP---FEALVEQTYANTRIYLILGHYYEHV 256
            :.:|..|         :|.:.:...:.:     :.:|   .|.|::.....:|:.::  :.:.:.
plant   181 NGVTALGDELEERRCKISYKAVLPLDVV-----ITSPVEIIEELIKIRGMESRVIVV--NTFPNT 238

  Fly   257 GLMV--SLQRRGILSKGDYFVVGIDIEQYDPAKPEKYLRGLLLEDVEPLAVQAFQSYLGI---VP 316
            |.|:  ..:|.|::.||..::.            ..:|..:|..:: ||..:.....|.:   .|
plant   239 GKMIFKEAERLGMMEKGYVWIA------------TTWLSSVLDSNL-PLDTKLVNGVLTLRLHTP 290

  Fly   317 TASVSFATFANEVNKYMERPPFNFPNPLGPFGGVKQISAEAAYLYDAVHLYAKALMEVLDSGGR- 380
            .:.......|...||........    |..:|         .|.||.|.:.|:|:..:|::||. 
plant   291 DSRKKRDFAARWKNKLSNNKTIG----LNVYG---------LYAYDTVWIIARAVKTLLEAGGNL 342

  Fly   381 PRNGSAIVAAIKGSRYR-SAMGYHVYIDENGDAAGNYTVLARGSVRNG----------------- 427
            ..:..|.:.::||.... ||:...    :.|....:|.|..:.|...|                 
plant   343 SFSNDAKLGSLKGEALNLSALSRF----DQGSQLLDYIVHTKMSGLTGPVQFHPDRSMLQPSYDI 403

  Fly   428 --------------RNQTVLGLRPVGTFIHRNSSLSSISKALPHQNLKLFSPIDWVGGTRPAAAP 478
                          .|.:.|.:.|..:|..:..:.||.::.|        :.:.|.|||  :..|
plant   404 INLVDDRVHQIGYWSNYSGLSIVPPESFYSKPPNRSSSNQHL--------NSVTWPGGT--SVTP 458

  Fly   479 R 479
            |
plant   459 R 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10738NP_729905.2 PBP1_SAP_GC-like 41..441 CDD:380593 89/462 (19%)
PK_GC-A_B 570..853 CDD:270944
HNOBA <860..907 CDD:462234
CYCc 886..1078 CDD:214485
GLR2NP_001318239.1 PBP1_GABAb_receptor_plant 35..427 CDD:380645 83/442 (19%)
GluR_Plant 468..808 CDD:270404
Lig_chan 591..842 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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