DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD7 and Kdm8

DIOPT Version :9

Sequence 1:NP_648651.1 Gene:JMJD7 / 39514 FlyBaseID:FBgn0036366 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_084118.1 Gene:Kdm8 / 77035 MGIID:1924285 Length:414 Species:Mus musculus


Alignment Length:293 Identity:70/293 - (23%)
Similarity:123/293 - (41%) Gaps:58/293 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ALDVLLQEAEELCIGSSVVELDRIPTALEFCREFYSKNQPVVIR-KALNWPAIGKWTPKYLIEAL 70
            |.||:|:.         :|...|.|....|.:.|....:||::. .|.:||.:.||:.:|:.|..
Mouse   173 APDVMLER---------MVPRLRCPPLQYFKQHFLVPGRPVILEGVADHWPCMKKWSLQYIQEIA 228

  Fly    71 GDRSVDVAITPNGYADGLATQNGQEYFVLPLETKMKLSEVVRR--LDDPTGAVHYIQKQNSNLSV 133
            |.|:|.|.: .:.|.|...:|           |.|.:.|.:::  |.:.....:..|.|   |..
Mouse   229 GCRTVPVEV-GSRYTDEDWSQ-----------TLMTVDEFIQKFILSEAKDVGYLAQHQ---LFD 278

  Fly   134 DLPELAADLRVSD---LDFAQQSFNKPPDAVNFWLGDERAVTSMHKDPYENVYCVISGHKDFVLI 195
            .:|||..|:.:.|   |...::.    ...:|.|.|.:..::.:|:||.:|....:.|.|...|.
Mouse   279 QIPELKRDISIPDYCCLGNGEEE----EITINAWFGPQGTISPLHQDPQQNFLVQVLGRKYIRLY 339

  Fly   196 PPHQLSCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLAKYPEYARAKPL 260
            .|.:    ...:||...:...::.|                    ||..:|||.|:|::..|..|
Mouse   340 SPQE----SEAVYPHETHILHNTSQ--------------------VDVENPDLEKFPKFTEAPFL 380

  Fly   261 KVRVHAGDILYLPNYWFHHVSQSHKCIAVNFWY 293
            ...:..||.|::|..::|:|.......:|:||:
Mouse   381 SCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWW 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD7NP_648651.1 Cupin_8 33..298 CDD:290351 63/267 (24%)
Kdm8NP_084118.1 Interaction with RCCD1. /evidence=ECO:0000250|UniProtKB:Q8N371 1..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..169
Cupin_8 189..414 CDD:290351 63/268 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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