DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD7 and Kdm8

DIOPT Version :10

Sequence 1:NP_648651.1 Gene:JMJD7 / 39514 FlyBaseID:FBgn0036366 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001032273.1 Gene:Kdm8 / 308976 RGDID:1304823 Length:414 Species:Rattus norvegicus


Alignment Length:271 Identity:65/271 - (23%)
Similarity:115/271 - (42%) Gaps:49/271 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIPTALEFCREFYSKNQPVVIR-KALNWPAIGKWTPKYLIEALGDRSVDVAITPNGYADGLATQN 92
            |.|....|.:.|....:||::. .|.:||.:.||:.:|:.|..|.|:|.|.: .:.|.|...:| 
  Rat   186 RCPPLQHFKKHFLVPGRPVILEGVADHWPCMKKWSLQYIQEIAGCRTVPVEV-GSRYTDEDWSQ- 248

  Fly    93 GQEYFVLPLETKMKLSEVVRR--LDDPTGAVHYIQKQNSNLSVDLPELAADLRVSD---LDFAQQ 152
                      |.|.::|.:.:  |.:.....:..|.|   |...:|||..|:.:.|   |...::
  Rat   249 ----------TLMTVNEFIHKYILSEAKDVGYLAQHQ---LFDQIPELKQDISIPDYCCLGNGEE 300

  Fly   153 SFNKPPDAVNFWLGDERAVTSMHKDPYENVYCVISGHKDFVLIPPHQLSCVPRGIYPTGVYKTSD 217
            .    ...:|.|.|.:..::.:|:||.:|....:.|.|...|..|.:    ...:||...:...:
  Rat   301 E----EITINAWFGPQGTISPLHQDPQQNFLVQVLGRKYIRLYSPQE----SEAVYPHETHILHN 357

  Fly   218 SGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLAKYPEYARAKPLKVRVHAGDILYLPNYWFHHVSQ 282
            :.|                    ||..:|||.|:|::..|..|...:..||.|::|..::|:|..
  Rat   358 TSQ--------------------VDVENPDLEKFPKFTEAPFLSCILSPGDTLFIPAKYWHYVRS 402

  Fly   283 SHKCIAVNFWY 293
            .....:|:||:
  Rat   403 LDLSFSVSFWW 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD7NP_648651.1 Cupin_8 33..299 CDD:463936 63/267 (24%)
Kdm8NP_001032273.1 Interaction with RCCD1. /evidence=ECO:0000250|UniProtKB:Q8N371 1..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..173
Cupin_8 189..414 CDD:463936 63/268 (24%)
Blue background indicates that the domain is not in the aligned region.

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