DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD7 and Hspbap1

DIOPT Version :10

Sequence 1:NP_648651.1 Gene:JMJD7 / 39514 FlyBaseID:FBgn0036366 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_599246.2 Gene:Hspbap1 / 171460 RGDID:620870 Length:479 Species:Rattus norvegicus


Alignment Length:310 Identity:69/310 - (22%)
Similarity:124/310 - (40%) Gaps:66/310 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CIGSSVVEL---------DRI-PTALEFCRE-FYSKNQPVVI-RKALNWPAIGKWTPKYLIEALG 71
            |.|||...|         :|: |...|..:| ..|..||.:. ....:||: ..||.|:|.:.|.
  Rat     5 CEGSSPQTLGERTMGEEGERVKPFTPEKAKEVIMSLQQPAIFCNMVFDWPS-RHWTAKHLSKVLE 68

  Fly    72 DRSVDVAI------------TPNGYADGLATQNGQEYFVLPLETKMKLSEVVRRLDDPTGAVHYI 124
            .:.:...:            |...|.|...    :|:.....: :.::|...::.|......:..
  Rat    69 GKQIRFRMGLRSTGTVPQFETECSYVDATL----EEFLAWNCD-QSRISGPFKKYDHSKFWAYAD 128

  Fly   125 QKQNSNLSVDLPELAADLRVSDLDF----AQQSFNKPPDAVNFWLGDERAVTSMHKDPYE-NVYC 184
            .|....|..|..::..::..||..|    .|:|        ..|:|...|.|..|.|.|. |:..
  Rat   129 YKYFVTLFEDKTDVFQEVMWSDFGFPGRNGQES--------TLWIGSLGAHTPCHLDSYGCNLVF 185

  Fly   185 VISGHKDFVLIPPHQLSCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLA 249
            .:.|.|.:.|.||.....    :|||.:               ..|.|..|::   ::.::|||.
  Rat   186 QVQGRKRWHLFPPEDTPF----LYPTRI---------------PYEESSVFSK---INVVNPDLK 228

  Fly   250 KYPEYARAKPLKVRVHAGDILYLPNYWFHHV-SQSHKCIAVNFWYDLDYD 298
            ::|::.:|:...|.:..|.:|::|.:|:|:| |.....:::|.|.:|:.|
  Rat   229 RFPQFQKARRHMVTLSPGQVLFVPRHWWHYVESLDPVTVSINSWIELEED 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD7NP_648651.1 Cupin_8 33..299 CDD:463936 62/286 (22%)
Hspbap1NP_599246.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/19 (26%)
Cupin_8 37..272 CDD:463936 57/270 (21%)
Interaction with HSPB1. /evidence=ECO:0000269|PubMed:10751411 88..208 29/136 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..412
Blue background indicates that the domain is not in the aligned region.

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