DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10140 and Gm30500

DIOPT Version :9

Sequence 1:NP_648648.2 Gene:CG10140 / 39511 FlyBaseID:FBgn0036363 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_017171830.1 Gene:Gm30500 / 102632425 MGIID:5589659 Length:614 Species:Mus musculus


Alignment Length:268 Identity:68/268 - (25%)
Similarity:89/268 - (33%) Gaps:68/268 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WYFICIFCGVFGARPKDLDVSGTTDSTLETDSTTSGLEYGLITGNLSIC------------GNVA 59
            ||  |: ...:.|||.|||...:|:......:|......|      |.|            |:..
Mouse   287 WY--CV-SAAWNARPFDLDNYTSTNCLCPATATGGKCPAG------SYCPEGSPEPIPCTPGSFC 342

  Fly    60 DNVFLPF-VGDCNRYYLCRSGQAIELQCEWPYEFNANTQSCVHPGD----ADCLPT-CEAFNFST 118
            ....||. .|.|...|.|..|.      |.|...:..|.....||.    |...|| |....||:
Mouse   343 ATSGLPTPTGPCQAGYFCIGGS------ESPAPVDEVTGGPCPPGSYCPVASHKPTPCPVGTFSS 401

  Fly   119 FSYQRTCTRYVLC---YYGKPVLRQCQDGLQYNSATDRCDFPQNVDCVES-----ECSIY--SNA 173
            ...|.|.:....|   :|.|      :.|||..|..  |  |....|..|     :.|:|  ...
Mouse   402 LPEQTTSSTCRSCPSGFYCK------EAGLQAPSGW--C--PAGYYCDSSTGPVQDFSLYPCPRG 456

  Fly   174 YHLRYVPSKVSCQKYFICGNGI--PREQTCTAGLHFSTKCDCCDIPSKSDCQIPAVER---KVQQ 233
            |   |.|...:...|..|..|.  ||:     ||...|:|..|  |:...|.:..:..   |||.
Mouse   457 Y---YCPVGTTKAMYHSCPVGTYGPRK-----GLTSITECQLC--PAGKFCSLAGISAPTGKVQT 511

  Fly   234 LSRLSPVT 241
            ...|:.|:
Mouse   512 ALGLNMVS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10140NP_648648.2 CBM_14 63..106 CDD:279884 12/47 (26%)
CBM_14 111..161 CDD:279884 14/52 (27%)
CBM_14 178..222 CDD:279884 13/45 (29%)
CBM_14 246..295 CDD:279884
Gm30500XP_017171830.1 TNFRSF 394..518 CDD:389949 37/143 (26%)
CRD1 394..411 CDD:276900 5/16 (31%)
CRD2 414..451 CDD:276900 12/46 (26%)
CRD3 453..506 CDD:276900 15/62 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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