DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10154 and obst-G

DIOPT Version :10

Sequence 1:NP_648646.2 Gene:CG10154 / 39509 FlyBaseID:FBgn0036361 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:216 Identity:46/216 - (21%)
Similarity:72/216 - (33%) Gaps:52/216 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 TCTKYVLCYYGKPVLRQCHDGLQYNNATDRCDFPEYVDC-------VANDCS------------- 187
            :|..|.:|..|..|...|.....:|..|..||.|:.|||       :.:|.|             
  Fly    45 SCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSESDEDDDEEMA 109

  Fly   188 ---------ATFQP------------EDIIYLGSKASCSKYYVCSNGHPWEQQCAPGLAYNPSCK 231
                     ||.:|            :|.:.|....||.:||||....|..:.|.....::|:.:
  Fly   110 KTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEYYVCKAKKPHLRSCPDKQHFSPTRR 174

  Fly   232 CCDFAKNVNCTIDAVARNILPYSRTPLRRADIKCPLMGTHFFPHKSRRDAYYYCVEGRGVTLDCT 296
            .|..|....|: .....|  ..|..|.....:...........|:|....:..|.....:.:||.
  Fly   175 ICMKASEAKCS-GGTREN--KESDGPATTGGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCP 236

  Fly   297 PGLYYD--------PKVEDCR 309
            .||:::        ||:..|:
  Fly   237 TGLHFNIATSRCDYPKIAKCQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10154NP_648646.2 CBM_14 130..181 CDD:426342 12/37 (32%)
CBM_14 197..239 CDD:426342 12/41 (29%)
ChtBD2 263..311 CDD:214696 10/55 (18%)
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 12/37 (32%)
CBM_14 132..184 CDD:426342 13/51 (25%)
CBM_14 204..256 CDD:426342 9/51 (18%)

Return to query results.
Submit another query.