DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10154 and LOC102554611

DIOPT Version :9

Sequence 1:NP_001189089.1 Gene:CG10154 / 39509 FlyBaseID:FBgn0036361 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_017455397.1 Gene:LOC102554611 / 102554611 RGDID:7689627 Length:637 Species:Rattus norvegicus


Alignment Length:87 Identity:23/87 - (26%)
Similarity:32/87 - (36%) Gaps:20/87 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 GSKASC-SKYYVCSNGHPWEQQCAPGLAYNPSCKCCDFAKNVNCTIDAVARNILPYSRTPL---R 259
            |.|... :.:...|....|  |.|||  |.||.....|...:|..|.|:|..:.....:|:   |
  Rat   376 GEKGEARASHTAASQTGSW--QFAPG--YTPSISPLGFQPELNRAITALASALSQARVSPVGASR 436

  Fly   260 RADIKC------------PLMG 269
            :|...|            |:||
  Rat   437 KASSHCDEQPHSTNQKDSPMMG 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10154NP_001189089.1 CBM_14 130..180 CDD:279884
CBM_14 197..239 CDD:279884 12/40 (30%)
ChtBD2 263..311 CDD:214696 4/19 (21%)
LOC102554611XP_017455397.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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