DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flr and SPAC9G1.05

DIOPT Version :9

Sequence 1:NP_648642.1 Gene:flr / 39505 FlyBaseID:FBgn0260049 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_593560.1 Gene:SPAC9G1.05 / 2542795 PomBaseID:SPAC9G1.05 Length:595 Species:Schizosaccharomyces pombe


Alignment Length:602 Identity:228/602 - (37%)
Similarity:352/602 - (58%) Gaps:22/602 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KNIYATLPRTQRGQPIVLGADPKGKNFLYTNGNSVIIRNIENPAIADVYTEHSCAVNVAKYSPSG 76
            |:.:|.:|.|:..||..:|.|.||:..:|....::|||.||.......|.||:....||::||||
pombe     6 KSTWAPVPSTKPSQPCKIGTDFKGERIVYPANKAIIIREIEKQENCFQYNEHTAPTTVARFSPSG 70

  Fly    77 FYIASGDASGKIRIWDTVNKEHLLKNEFQPIAGPIKDISWSPDNQRIVAVGEGRERFGHVFMSET 141
            :|:||||..|.:||||...::.:|||:...|:|.|.|:.|..|:|||:|||||:||:||.|.:::
pombe    71 YYVASGDNQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERYGHAFTADS 135

  Fly   142 GTSVGEISGQSKSINSADFRPARPFRIVTGSEDNTIAVFEGPPFKFKMTKQDHSRFVQAVRYSPD 206
            |.|||||.|.|..:|:...|.:||||..|.|:||:|..|.|.|::|..:.:.||:||..|||||:
pombe   136 GNSVGEIFGHSSVVNAVSLRKSRPFRAATASDDNSINFFHGTPYRFNRSLRVHSKFVYDVRYSPN 200

  Fly   207 GKFFASAGFDGKVFLYDGTSSELVGEFGSPAHKGGVYALAWKPDSTQLLTCSGDKTCRLWTVESR 271
            .:.|||||.||||:::||.:.:.|.|.  .||||.:::::|.|||:|.:|.|...:|::|...:.
pombe   201 DERFASAGADGKVYVFDGKTGDQVYEI--DAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTG 263

  Fly   272 ELVSEFVMGTTVDDQQVSCLW-QGDNLITVSLSGVITYLNVADPSKPLRVVKGHNKPITVLGLSD 335
            .|:.|::  ::...|.|..:| ..|.:|.|:..|.:||||.:| .|.:..:.||.:.||...||.
pombe   264 SLIREWL--SSDKKQLVGTVWPTKDLIIVVNSKGNLTYLNPSD-CKVIDTIYGHQRSITAATLSP 325

  Fly   336 DRSTIYTGSHDGVVTNWNSGSGTNDRITGTGHGNQINGIAAWGDFVYTCGIDDSLRQFSVEGNSY 400
            |.:..||.|:||.|.:|:.|......:.|..|.||:..:....|.|.|.|:||:||...::...:
pombe   326 DATHFYTASYDGTVLSWDIGKQKAFPLVGESHTNQVMQMIMADDHVITIGMDDTLRVIDIKQGCF 390

  Fly   401 T-DYVVKLNCQPRGLAILRNENIIALACIKELTLVQDQKKIFSLPIKYEASSIAVNADTSDVAVG 464
            . |.|.....||.|:..:  |:.:.|..:.::.:::....:.:....|:.|::|.:...|:..||
pombe   391 AKDNVFPTGYQPIGVCSV--EDCLILVTVSDIQVLRSLTGVSTAKTIYQPSAVASHPLKSEFCVG 453

  Fly   465 GDDQKLHIYTL-KGGVLEPKVELDHLGAVTDVSYSPDLKYLVACDAHRKVVLYSVEEYKPAHNKE 528
            |:|..::|:|| ||.:.|.....|....:|.::||||.|||...||..|||||.      |:::|
pombe   454 GEDCCVYIHTLEKGELCEVAQCKDSTAPITCLAYSPDGKYLACGDASGKVVLYD------ANSRE 512

  Fly   529 -----WGFHSARVNTVAWSPNSLLVASGSLDTTIIIWSVANPAKHTIIKNAHPQSQITRLVWLDN 588
                 |.||:.|:..::|:..|..:|:.||||.|.|:||..|.|:..:||||... .|::.|:..
pombe   513 VITSRWAFHTGRILGMSWNAKSTHLATASLDTNIHIYSVERPMKYIAMKNAHSLG-ATQVEWVSE 576

  Fly   589 NTVISTGQDCNTKVWHV 605
            |.::|||.|...|||.|
pombe   577 NELLSTGSDAAIKVWSV 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flrNP_648642.1 WD40 26..557 CDD:225201 202/538 (38%)
WD40 59..353 CDD:238121 127/294 (43%)
WD40 repeat 68..106 CDD:293791 19/37 (51%)
WD40 repeat 111..149 CDD:293791 22/37 (59%)
WD40 repeat 156..192 CDD:293791 15/35 (43%)
WD40 repeat 198..234 CDD:293791 19/35 (54%)
WD40 repeat 242..278 CDD:293791 11/35 (31%)
WD40 repeat 287..306 CDD:293791 6/19 (32%)
WD40 317..607 CDD:295369 98/296 (33%)
WD40 repeat 330..352 CDD:293791 9/21 (43%)
WD40 repeat 372..407 CDD:293791 10/35 (29%)
WD40 repeat 411..442 CDD:293791 4/30 (13%)
WD40 repeat 450..485 CDD:293791 13/35 (37%)
WD40 repeat 492..528 CDD:293791 16/35 (46%)
WD40 520..>607 CDD:225201 34/91 (37%)
WD40 repeat 536..573 CDD:293791 13/36 (36%)
WD40 repeat 580..603 CDD:293791 8/22 (36%)
SPAC9G1.05NP_593560.1 WD40 52..343 CDD:238121 127/295 (43%)
WD40 repeat 62..100 CDD:293791 19/37 (51%)
WD40 repeat 105..143 CDD:293791 22/37 (59%)
WD40 141..593 CDD:225201 166/465 (36%)
WD40 repeat 150..186 CDD:293791 15/35 (43%)
WD40 183..550 CDD:295369 129/379 (34%)
WD40 repeat 192..226 CDD:293791 18/33 (55%)
WD40 repeat 234..271 CDD:293791 11/38 (29%)
WD40 repeat 277..300 CDD:293791 7/22 (32%)
WD40 repeat 318..355 CDD:293791 13/36 (36%)
WD40 repeat 361..383 CDD:293791 8/21 (38%)
WD40 repeat 438..474 CDD:293791 13/35 (37%)
WD40 repeat 482..522 CDD:293791 19/45 (42%)
WD40 repeat 525..549 CDD:293791 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 105 1.000 Domainoid score I1706
eggNOG 1 0.900 - - E1_KOG0318
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6628
Inparanoid 1 1.050 423 1.000 Inparanoid score I338
OMA 1 1.010 - - QHG53916
OrthoFinder 1 1.000 - - FOG0003250
OrthoInspector 1 1.000 - - oto100645
orthoMCL 1 0.900 - - OOG6_102813
Panther 1 1.100 - - LDO PTHR19856
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1789
SonicParanoid 1 1.000 - - X2198
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.