DRSC/TRiP Functional Genomics Resources

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Protein Alignment flr and unc-78

DIOPT Version :9

Sequence 1:NP_648642.1 Gene:flr / 39505 FlyBaseID:FBgn0260049 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_001024356.1 Gene:unc-78 / 180631 WormBaseID:WBGene00006810 Length:611 Species:Caenorhabditis elegans


Alignment Length:604 Identity:250/604 - (41%)
Similarity:372/604 - (61%) Gaps:15/604 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IYATLPRTQRGQPIVLGADPKGKNFLYTNGNSVIIRNIENPAIADVYTEHSCAVNVAKYSPSGFY 78
            ::.:||||.||..:|||..|.|....|.||.||....:.:....::|||||....|||.||||:|
 Worm     9 LFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 73

  Fly    79 IASGDASGKIRIWDTVNKEHLLKNEFQPIAGPIKDISWSPDNQRIVAVGEGRERFGHVFMSETGT 143
            .||||..|.:|||||....|:||......:||:|||||..:::||.|||||||||||||:.:|||
 Worm    74 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 138

  Fly   144 SVGEISGQSKSINSADFRPARPFRIVTGSEDNTIAVFEGPPFKFKMTKQDHSRFVQAVRYSPDGK 208
            |.|.::||::::||.||:|:|||||::||:|||:|:|||||||||.|..:|::||.:|||:|||.
 Worm   139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203

  Fly   209 FFASAGFDGKVFLYDGTSSELVGEF-----GSPAHKGGVYALAWKPDSTQLLTCSGDKTCRLWTV 268
            .|||.|.||.:.||:|......|.|     .:.||.|.|:.|.|.||.|::.:.|.|||.::|.|
 Worm   204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268

  Fly   269 ESRELVSEFVMGTTVDDQQVSCLWQGDNLITVSLSGVITYLNVADPSKPLRVVKGHNKPITVLGL 333
            .:.::.....:||.::|||:..:|....|:::|.:|.|.::| .:.....:|..||||.||.|..
 Worm   269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN-PELGSIDQVRYGHNKAITALSS 332

  Fly   334 SDDRSTIYTGSHDGVVTNWNSGSGTNDRITGTGHGNQINGI--AAWGDFVYTCGIDDSLRQFSVE 396
            |.|..|:::...:|.:.:|:..:|.::|:....|...|.||  .:.|| ::|...||.|:.....
 Worm   333 SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAG 396

  Fly   397 G---NSYTDYVVKLNCQPRGLAILRNENIIALACIKELTLVQDQKKIFSLPIKYEASSIAVNADT 458
            |   :|......||:.||.|||:..:.:|...||.|.:. :....|:..:||.|.:|.:|::.|.
 Worm   397 GSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA-IYSHGKLTEVPISYNSSCVALSNDK 460

  Fly   459 SDVAVGGDDQKLHIYTLKGGVLEPKVELDHLGAVTDVSYSPDLKYLVACDAHRKVVLYSV-EEYK 522
            ..|||||.|.|:|:|.|.|..:.....:.|...:|.|::|.:..:|||.|..|||:.||| ..::
 Worm   461 QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525

  Fly   523 PAHNKEWGFHSARVNTVAWSPNSLLVASGSLDTTIIIWSVANPAKH-TIIKNAHPQSQITRLVWL 586
            .||...|.||:|:|..|:|||:::.:|:||||.::|:|::..|:.| .|||.||..|.:..::||
 Worm   526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 590

  Fly   587 DNNTVISTGQDCNTKVWHV 605
            :..|::|.|||.|.|.|:|
 Worm   591 NETTIVSAGQDSNIKFWNV 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flrNP_648642.1 WD40 26..557 CDD:225201 223/541 (41%)
WD40 59..353 CDD:238121 139/298 (47%)
WD40 repeat 68..106 CDD:293791 21/37 (57%)
WD40 repeat 111..149 CDD:293791 25/37 (68%)
WD40 repeat 156..192 CDD:293791 26/35 (74%)
WD40 repeat 198..234 CDD:293791 18/40 (45%)
WD40 repeat 242..278 CDD:293791 12/35 (34%)
WD40 repeat 287..306 CDD:293791 5/18 (28%)
WD40 317..607 CDD:295369 107/296 (36%)
WD40 repeat 330..352 CDD:293791 5/21 (24%)
WD40 repeat 372..407 CDD:293791 10/39 (26%)
WD40 repeat 411..442 CDD:293791 9/30 (30%)
WD40 repeat 450..485 CDD:293791 14/34 (41%)
WD40 repeat 492..528 CDD:293791 15/36 (42%)
WD40 520..>607 CDD:225201 37/87 (43%)
WD40 repeat 536..573 CDD:293791 16/37 (43%)
WD40 repeat 580..603 CDD:293791 9/22 (41%)
unc-78NP_001024356.1 WD40 50..560 CDD:225201 213/512 (42%)
WD40 55..352 CDD:238121 139/297 (47%)
WD40 repeat 63..101 CDD:293791 21/37 (57%)
WD40 repeat 106..144 CDD:293791 25/37 (68%)
WD40 repeat 151..187 CDD:293791 26/35 (74%)
WD40 repeat 193..229 CDD:293791 17/35 (49%)
WD40 238..608 CDD:295369 130/372 (35%)
WD40 repeat 242..278 CDD:293791 12/35 (34%)
WD40 repeat 287..308 CDD:293791 6/20 (30%)
WD40 repeat 327..363 CDD:293791 10/35 (29%)
WD40 repeat 382..440 CDD:293791 17/58 (29%)
WD40 repeat 447..525 CDD:293791 30/77 (39%)
WD40 repeat 539..577 CDD:293791 16/37 (43%)
WD40 repeat 584..607 CDD:293791 9/22 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165256
Domainoid 1 1.000 138 1.000 Domainoid score I2999
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6628
Inparanoid 1 1.050 513 1.000 Inparanoid score I707
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53916
OrthoDB 1 1.010 - - D179485at33208
OrthoFinder 1 1.000 - - FOG0003250
OrthoInspector 1 1.000 - - otm14180
orthoMCL 1 0.900 - - OOG6_102813
Panther 1 1.100 - - O PTHR19856
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1789
SonicParanoid 1 1.000 - - X2198
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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