DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slc25a1 and sea

DIOPT Version :10

Sequence 1:NP_989391.1 Gene:slc25a1 / 395026 XenbaseID:XB-GENE-491686 Length:332 Species:Xenopus tropicalis
Sequence 2:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster


Alignment Length:297 Identity:203/297 - (68%)
Similarity:235/297 - (79%) Gaps:4/297 - (1%)


- Green bases have known domain annotations that are detailed below.


 Frog    33 AAAAPAGGSKLTHPGKAILAGGIAGGIEICITFPTEYVKTQLQLDEKANPPRYRGIWDCVRQTVE 97
            ||||.:|...|    |.|:||||.||||||||:||||||||||||||....:|.||:|||::||.
  Fly    24 AAAADSGQVGL----KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVG 84

 Frog    98 GHGVKGLYRGLSSLLYGSIPKAAVRFGMFEFLSNRMRDANGKLDSKRSLLCGLGAGVAEAVVVVC 162
            ..|..|||||||.|:||||||:|.|||.||||.:...|:.|:|.:...|||||||||.||:|.|.
  Fly    85 ERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVT 149

 Frog   163 PMETIKVKFIHDQCSPNPKYRGFFHGVREIIRVQGIKGTYQGLTATVLKQGSNQAIRFFVMTSLR 227
            ||||||||||:||.|.|||:|||.|||.:||:.:||.|.|:|||.|:|||||||||||||:.||:
  Fly   150 PMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLK 214

 Frog   228 NWYRGDDPNKPMNPLVTGAFGAIAGAASVFGNTPLDVVKTRMQGLEAHKYKSTWDCAYKILKYEG 292
            :.|:|||..||:..||.|.||||||||||||||||||||||||||||.|||:|..||.:|||.||
  Fly   215 DLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEG 279

 Frog   293 PRAFYKGTIPRLGRVCLDVAIVFIIYDEVVKVLNKVW 329
            |.||||||:||||||||||||.|:|||..:.:.||||
  Fly   280 PAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVW 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slc25a1NP_989391.1 Mito_carr 45..135 CDD:395101 59/89 (66%)
Mito_carr <162..233 CDD:395101 48/70 (69%)
Mito_carr 255..327 CDD:395101 54/71 (76%)
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 59/86 (69%)
Mito_carr 125..220 CDD:395101 63/94 (67%)
Mito_carr 235..314 CDD:395101 61/78 (78%)

Return to query results.
Submit another query.