DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and TUP1

DIOPT Version :10

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_010007.1 Gene:TUP1 / 850445 SGDID:S000000680 Length:713 Species:Saccharomyces cerevisiae


Alignment Length:418 Identity:95/418 - (22%)
Similarity:170/418 - (40%) Gaps:71/418 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DPALERHF-------TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVN 64
            :|||.|..       ..|:..:..::|..||..:||....:|.: :.::..:...|.:..||..|
Yeast   326 NPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQV-YRVSDGSLVARLSDDSAANN 389

  Fly    65 GVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
            ......:.|...|..::...                          .:|...:.|.:...:|::.
Yeast   390 HRNSITENNTTTSTDNNTMT--------------------------TTTTTTITTTAMTSAAELA 428

  Fly   130 RVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAW 194
            :.......||....:.::||..|||:||.:||.::|:.:||:|:::.:.|............|.:
Yeast   429 KDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY 493

  Fly   195 HPWGNMLAVALGCNRIKIFDV-SGSQLLQLYVVHSAPVNDVAFHP-SGHFLLSGSDDRTIRILDL 257
            .|.|:.|....|...::|:|: :|...|.|.:...  |..||..| .|.::.:||.||.:|:.|.
Yeast   494 FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDS 556

  Fly   258 LEGRPIYTL-------TGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSAL 315
            ..|..:..|       |||.|:|.:|.|:|||....:|..||.:.:|  ||.  :|:........
Yeast   557 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW--NLQ--NANNKSDSKTP 617

  Fly   316 ASSSCESS---------GVSSKQSEGSSTSKSNDLSIRIDPRQS--LAYQLSEENFQVLDVSIES 369
            .|.:||.:         .|::.|::....|.|.|..:....::|  ....|......|:.|::.:
Yeast   618 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 682

  Fly   370 GSDL-----------CSCSARLDEISKL 386
            ||.|           ..|.||:.:..|:
Yeast   683 GSPLGPEYNVFATGSGDCKARIWKYKKI 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 <7..298 CDD:441893 72/306 (24%)
WD40 repeat 22..58 CDD:293791 7/35 (20%)
WD40 repeat 63..99 CDD:293791 3/35 (9%)
WD40 repeat 106..140 CDD:293791 4/33 (12%)
WD40 repeat 147..183 CDD:293791 14/35 (40%)
WD40 repeat 189..224 CDD:293791 9/35 (26%)
WD40 repeat 231..254 CDD:293791 9/23 (39%)
WD40 repeat 273..297 CDD:293791 9/23 (39%)
TUP1NP_010007.1 Tup_N 11..88 CDD:400755
WD40 343..706 CDD:238121 90/395 (23%)
WD40 repeat 347..383 CDD:293791 7/36 (19%)
WD40 repeat 394..438 CDD:293791 5/69 (7%)
WD40 repeat 447..483 CDD:293791 14/35 (40%)
WD40 repeat 488..523 CDD:293791 9/34 (26%)
WD40 repeat 530..566 CDD:293791 11/35 (31%)
WD40 repeat 579..627 CDD:293791 16/51 (31%)
WD40 repeat 633..669 CDD:293791 6/35 (17%)
WD40 repeat 675..705 CDD:293791 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.

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