DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and WDR5a

DIOPT Version :9

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_190535.1 Gene:WDR5a / 824128 AraportID:AT3G49660 Length:317 Species:Arabidopsis thaliana


Alignment Length:295 Identity:73/295 - (24%)
Similarity:148/295 - (50%) Gaps:15/295 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ-----AARCIRFASHSAPVNGVAWSPKGNL 74
            |.|:..::.::|..||..:|::|.|.|:..:.:|.     |.....|..|...::.||:|.....
plant    21 TSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARF 85

  Fly    75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSS 139
            :.||..|:|:|:|:.:...:....:.|:.....|:|:...:::::.|.|::.:||.|...:.:..
plant    86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV 150

  Fly   140 FAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQ-LAWHPWGNMLAV 203
            ....::.|.:..|:.:|.|:.::|.|...||:|..:|.||:|..::...|.. :.:.|.|..:.|
plant   151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILV 215

  Fly   204 ALGCNRIKIFDVSGSQLLQLYVVHSAPVN-----DVAFH-PSGHFLLSGSDDRTIRILDLLEGRP 262
            ....|.::::::|.::.|:.|..|   ||     ..||. .:|..::|||:|..:.:.:|...:.
plant   216 GTLDNTLRLWNISSAKFLKTYTGH---VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277

  Fly   263 IYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
            :..|.|||:.|..||.....:..|:|..|:.:.:|
plant   278 LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 10..298 CDD:238121 73/295 (25%)
WD40 14..388 CDD:225201 73/295 (25%)
WD40 repeat 22..58 CDD:293791 10/40 (25%)
WD40 repeat 63..99 CDD:293791 9/35 (26%)
WD40 repeat 106..140 CDD:293791 7/33 (21%)
WD40 repeat 147..183 CDD:293791 13/35 (37%)
WD40 repeat 189..224 CDD:293791 7/35 (20%)
WD40 repeat 231..254 CDD:293791 9/28 (32%)
WD40 repeat 273..297 CDD:293791 6/23 (26%)
WDR5aNP_190535.1 WD40 16..312 CDD:238121 72/293 (25%)
WD40 repeat 27..69 CDD:293791 10/41 (24%)
WD40 repeat 75..111 CDD:293791 9/35 (26%)
WD40 repeat 116..152 CDD:293791 7/35 (20%)
WD40 repeat 159..194 CDD:293791 12/34 (35%)
WD40 repeat 201..237 CDD:293791 6/35 (17%)
WD40 repeat 245..282 CDD:293791 8/36 (22%)
WD40 repeat 288..312 CDD:293791 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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