| Sequence 1: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_062627.3 | Gene: | Wsb1 / 78889 | MGIID: | 1926139 | Length: | 421 | Species: | Mus musculus |
| Alignment Length: | 282 | Identity: | 66/282 - (23%) |
|---|---|---|---|
| Similarity: | 113/282 - (40%) | Gaps: | 43/282 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 QLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN-LVASAGHDRTVKI 86
Fly 87 WEPKLRGVSGEFV----AHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWV 147
Fly 148 RSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKI 212
Fly 213 FDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAV- 276
Fly 277 -AFSRDGDKFATGGSDRQLLVW 297 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Poc1 | NP_001261799.1 | WD40 | <7..298 | CDD:441893 | 66/282 (23%) |
| WD40 repeat | 22..58 | CDD:293791 | 7/34 (21%) | ||
| WD40 repeat | 63..99 | CDD:293791 | 11/36 (31%) | ||
| WD40 repeat | 106..140 | CDD:293791 | 4/33 (12%) | ||
| WD40 repeat | 147..183 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 189..224 | CDD:293791 | 4/34 (12%) | ||
| WD40 repeat | 231..254 | CDD:293791 | 7/22 (32%) | ||
| WD40 repeat | 273..297 | CDD:293791 | 9/25 (36%) | ||
| Wsb1 | NP_062627.3 | WD40 | <38..378 | CDD:441893 | 65/280 (23%) |
| WD 1 | 124..165 | 7/31 (23%) | |||
| WD 2 | 168..208 | 12/42 (29%) | |||
| WD40 repeat | 174..212 | CDD:293791 | 11/40 (28%) | ||
| WD 3 | 212..251 | 7/38 (18%) | |||
| WD40 repeat | 217..253 | CDD:293791 | 5/35 (14%) | ||
| WD 4 | 254..293 | 14/38 (37%) | |||
| WD40 repeat | 261..299 | CDD:293791 | 14/37 (38%) | ||
| WD 5 | 309..346 | 10/55 (18%) | |||
| WD40 repeat | 314..353 | CDD:293791 | 10/42 (24%) | ||
| SOCS | 382..420 | CDD:470605 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||