DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and Wdr5b

DIOPT Version :10

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_081389.1 Gene:Wdr5b / 69544 MGIID:1916794 Length:328 Species:Mus musculus


Alignment Length:358 Identity:93/358 - (25%)
Similarity:160/358 - (44%) Gaps:85/358 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
            ||.....|||..|:.::|.|:|..:|:|:.|:.:|:|.............||..::.||||...:
Mouse    30 ALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94

  Fly    74 LVASAGHDRTVKIWEPK----LRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
            .:.||..|:|:|:|:.:    |:.:.|    ||..|...||:...:|:::.|.|:|.|||.|...
Mouse    95 RLVSASDDKTLKVWDMRSGKCLKTLKG----HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG 155

  Fly   135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGN 199
            :.:.:.:..::.:.:..|:.||.|:.:.|.|...||:|..||:|:||..:|            ||
Mouse   156 KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADE------------GN 208

  Fly   200 MLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIY 264
                                         .||:.|.|.|:|.::|:.:.|.|:::.|...||.:.
Mouse   209 -----------------------------PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLK 244

  Fly   265 TLTGHTDAVNAV--AFSRDGDKFATGGS-DRQLLVWQSNLHTYD--------------ASQFEAK 312
            |.|||.:....:  :||..|.|:...|| |..:.:|  ||.|.:              |:....|
Mouse   245 TYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW--NLQTKEIVQRLQGHTDVVISAACHPTK 307

  Fly   313 SALASSSCESSGVSSKQSEGSSTSKSNDLSIRI 345
            :.:||::.|                 ||.:|::
Mouse   308 NIIASAALE-----------------NDKTIKV 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 <7..298 CDD:441893 81/295 (27%)
WD40 repeat 22..58 CDD:293791 8/35 (23%)
WD40 repeat 63..99 CDD:293791 12/39 (31%)
WD40 repeat 106..140 CDD:293791 10/33 (30%)
WD40 repeat 147..183 CDD:293791 14/35 (40%)
WD40 repeat 189..224 CDD:293791 2/34 (6%)
WD40 repeat 231..254 CDD:293791 8/22 (36%)
WD40 repeat 273..297 CDD:293791 7/26 (27%)
Wdr5bNP_081389.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
WD40 <30..325 CDD:441893 93/358 (26%)
WD 1 37..76 12/38 (32%)
WD40 repeat 42..79 CDD:293791 9/36 (25%)
WD 2 79..120 13/40 (33%)
WD40 repeat 85..121 CDD:293791 11/35 (31%)
WD 3 122..162 13/39 (33%)
WD40 repeat 126..162 CDD:293791 11/35 (31%)
WD 4 163..202 12/38 (32%)
WD40 repeat 169..204 CDD:293791 14/34 (41%)
DDB1-binding motif 186..190 1/3 (33%)
WD 5 206..247 16/81 (20%)
WD40 repeat 211..247 CDD:293791 12/35 (34%)
WD 6 250..290 11/41 (27%)
WD40 repeat 255..292 CDD:293791 11/38 (29%)
WD 7 293..328 8/48 (17%)
WD40 repeat 298..324 CDD:293791 8/43 (19%)
Blue background indicates that the domain is not in the aligned region.

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