Protein Alignment Poc1 and poc1a

DIOPT Version :10

• Sequence 1: NP_001261799.1
• Gene: Poc1 / 39502
• FlyBaseID: FBgn0036354
• Length: 403
• Species: Drosophila melanogaster
• Sequence 2: NP_001016608.1
• Gene: poc1a / 549362
• XenbaseID: XB-GENE-5767105
• Length: 441
• Species: Xenopus tropicalis
• Alignment Length: 415
• Identity: 156/415 - (37%)
• Similarity: 250/415 - (60%)
• Gaps: 17/415 - (4%)

  Fly     1 MQGLFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNG 65
            |.|...||:|||||.||...:|.:.|.|:..|:|:.|.||.:::||:....|..||..|...:..
 Frog     1 MAGQPEDPSLERHFKGHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILS 65

  Fly    66 VAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
            |.:||.|:|:|||..|:||::|.|.::|.|..|.||:..||||.|...|..::||||||:.|:|.
 Frog    66 VDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWT 130

  Fly   131 VARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWH 195
            |.|::|:.|..|..||||.|||||:|:|:.:|||||:::::|..|.||:.:|.|.......:.:|
 Frog   131 VHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFH 195

  Fly   196 PWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEG 260
            |.|..:|.|...|.:|::|:..::|:|.|.|||..||.::|||||::|::.|:|.|:::||||||
 Frog   196 PSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEG 260

  Fly   261 RPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHT---YDASQFEAKSALASSSCES 322
            |.:|||.||...|.:|.|||:|:.||:||||.|::||::|..:   .|..::.......:....:
 Frog   261 RLLYTLHGHQGPVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKYRQHDQFLNGGDYT 325

  Fly   323 SGVSS----KQSEGSSTSKSNDLSIR------IDPRQSLAY---QLSEENFQVLDVSIES-GSDL 373
            |||.:    :....:.|.:::||..|      .|....|:|   .:.:.:.|..|.::.: .|.|
 Frog   326 SGVPAADRHRPERNAQTDQADDLEPRHIQMSAKDRSSPLSYTSRSIDQHHPQAEDGNLRTVASTL 390

  Fly   374 CSCSARLDEISKLLDSIDERVRRLE 398
            .....:||.:::.:..:::|:...|
 Frog   391 EHIVGQLDILTRTVGILEQRLSLTE 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poc1	NP_001261799.1	WD40	<7..298	CDD:441893	133/290 (46%)
		WD40 repeat	22..58	CDD:293791	13/35 (37%)
		WD40 repeat	63..99	CDD:293791	15/35 (43%)
		WD40 repeat	106..140	CDD:293791	16/33 (48%)
		WD40 repeat	147..183	CDD:293791	18/35 (51%)
		WD40 repeat	189..224	CDD:293791	10/34 (29%)
		WD40 repeat	231..254	CDD:293791	11/22 (50%)
		WD40 repeat	273..297	CDD:293791	13/23 (57%)
poc1a	NP_001016608.1	WD40	<4..300	CDD:441893	134/295 (45%)
		WD 1	16..55		13/38 (34%)
		WD40 repeat	21..58	CDD:293791	13/36 (36%)
		WD 2	58..97		16/38 (42%)
		WD40 repeat	64..100	CDD:293791	16/35 (46%)
		WD 3	100..139		19/38 (50%)
		WD40 repeat	105..141	CDD:293791	18/35 (51%)
		WD 4	142..181		21/38 (55%)
		WD40 repeat	148..182	CDD:293791	17/33 (52%)
		WD 5	184..223		10/38 (26%)
		WD40 repeat	189..225	CDD:293791	10/35 (29%)
		WD 6	226..265		21/38 (55%)
		WD40 repeat	231..267	CDD:293791	20/35 (57%)
		WD 7	268..307		18/38 (47%)
		WD40 repeat	273..297	CDD:293791	13/23 (57%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	323..380		11/56 (20%)