Sequence 1: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814294.1 | Gene: | poc1b / 448445 | XenbaseID: | XB-GENE-944930 | Length: | 470 | Species: | Xenopus tropicalis |
Alignment Length: | 388 | Identity: | 154/388 - (39%) |
---|---|---|---|
Similarity: | 235/388 - (60%) | Gaps: | 9/388 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MQGLFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNG 65
Fly 66 VAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
Fly 131 VARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWH 195
Fly 196 PWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEG 260
Fly 261 RPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQ---FEAKSALASSSCES 322
Fly 323 SGVSSKQSEGSSTSKSNDLSIRIDPRQSLAYQLSEENFQVLDVSIESGSDLCSCSARLDEISK 385 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Poc1 | NP_001261799.1 | WD40 | 10..298 | CDD:238121 | 134/287 (47%) |
WD40 | 14..388 | CDD:225201 | 147/375 (39%) | ||
WD40 repeat | 22..58 | CDD:293791 | 14/35 (40%) | ||
WD40 repeat | 63..99 | CDD:293791 | 17/35 (49%) | ||
WD40 repeat | 106..140 | CDD:293791 | 17/33 (52%) | ||
WD40 repeat | 147..183 | CDD:293791 | 19/35 (54%) | ||
WD40 repeat | 189..224 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 231..254 | CDD:293791 | 12/22 (55%) | ||
WD40 repeat | 273..297 | CDD:293791 | 13/23 (57%) | ||
poc1b | XP_012814294.1 | WD40 | 12..298 | CDD:238121 | 133/285 (47%) |
WD40 repeat | 21..58 | CDD:293791 | 14/36 (39%) | ||
WD40 repeat | 64..100 | CDD:293791 | 16/35 (46%) | ||
WD40 repeat | 105..141 | CDD:293791 | 19/35 (54%) | ||
WD40 repeat | 148..183 | CDD:293791 | 18/34 (53%) | ||
WD40 repeat | 190..225 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 231..267 | CDD:293791 | 23/35 (66%) | ||
WD40 repeat | 273..297 | CDD:293791 | 13/23 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 305 | 1.000 | Inparanoid score | I2604 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1196215at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003920 | |
OrthoInspector | 1 | 1.000 | - | - | otm48917 | |
Panther | 1 | 1.100 | - | - | O | PTHR44019 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4724 |
SonicParanoid | 1 | 1.000 | - | - | X2699 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.100 |