Sequence 1: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246361.1 | Gene: | Lis-1 / 36791 | FlyBaseID: | FBgn0015754 | Length: | 411 | Species: | Drosophila melanogaster |
Alignment Length: | 309 | Identity: | 88/309 - (28%) |
---|---|---|---|
Similarity: | 143/309 - (46%) | Gaps: | 29/309 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAG 79
Fly 80 HDRTVKIWEPK-----LRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSS 139
Fly 140 FAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAW---------- 194
Fly 195 ----------HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDD 249
Fly 250 RTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ 298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Poc1 | NP_001261799.1 | WD40 | 10..298 | CDD:238121 | 87/307 (28%) |
WD40 | 14..388 | CDD:225201 | 88/309 (28%) | ||
WD40 repeat | 22..58 | CDD:293791 | 8/35 (23%) | ||
WD40 repeat | 63..99 | CDD:293791 | 11/40 (28%) | ||
WD40 repeat | 106..140 | CDD:293791 | 13/33 (39%) | ||
WD40 repeat | 147..183 | CDD:293791 | 10/35 (29%) | ||
WD40 repeat | 189..224 | CDD:293791 | 12/54 (22%) | ||
WD40 repeat | 231..254 | CDD:293791 | 13/22 (59%) | ||
WD40 repeat | 273..297 | CDD:293791 | 3/23 (13%) | ||
Lis-1 | NP_001246361.1 | LisH | 9..40 | CDD:128913 | |
WD40 | 100..409 | CDD:238121 | 87/307 (28%) | ||
WD40 repeat | 111..148 | CDD:293791 | 9/36 (25%) | ||
WD40 repeat | 154..191 | CDD:293791 | 9/36 (25%) | ||
WD40 repeat | 196..232 | CDD:293791 | 14/35 (40%) | ||
WD40 repeat | 239..274 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 280..336 | CDD:293791 | 12/55 (22%) | ||
WD40 repeat | 342..378 | CDD:293791 | 18/35 (51%) | ||
WD40 repeat | 384..408 | CDD:293791 | 3/23 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45442347 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |