DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and APAF1

DIOPT Version :9

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_863651.1 Gene:APAF1 / 317 HGNCID:576 Length:1248 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 10..298 CDD:238121
WD40 14..388 CDD:225201
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..140 CDD:293791
WD40 repeat 147..183 CDD:293791
WD40 repeat 189..224 CDD:293791
WD40 repeat 231..254 CDD:293791
WD40 repeat 273..297 CDD:293791
APAF1NP_863651.1 CARD_APAF1 7..92 CDD:260034
NB-ARC 129..374 CDD:395745
APAF1_C 453..587 CDD:407760
WD40 607..910 CDD:238121
WD 1-1 613..652
WD40 repeat 623..655 CDD:293791
WD 1-2 655..694
WD40 repeat 660..697 CDD:293791
WD 1-3 697..738
WD40 repeat 703..741 CDD:293791
WD 1-4 741..780
WD40 repeat 746..791 CDD:293791
WD 1-5 796..836
WD40 repeat 802..870 CDD:293791
WD 1-6 838..877
WD 1-7 880..910
WD40 repeat 885..939 CDD:293791
Interpropeller linker. /evidence=ECO:0000250 910..921
WD 2-1 922..958
WD 2-2 959..998
WD40 961..1234 CDD:238121
WD40 repeat 964..990 CDD:293791
WD 2-3 1001..1040
WD40 repeat 1006..1030 CDD:293791
WD 2-4 1042..1080
WD40 repeat 1047..1082 CDD:293791
WD 2-5 1083..1122
WD40 repeat 1089..1124 CDD:293791
WD 2-6 1125..1164
WD40 repeat 1130..1172 CDD:293791
WD 2-7 1175..1212
WD40 repeat 1180..1213 CDD:293791
WD 2-8 1213..1248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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