DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and Wdr5b

DIOPT Version :9

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001019937.1 Gene:Wdr5b / 303907 RGDID:1308567 Length:328 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 10..298 CDD:238121
WD40 14..388 CDD:225201
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..140 CDD:293791
WD40 repeat 147..183 CDD:293791
WD40 repeat 189..224 CDD:293791
WD40 repeat 231..254 CDD:293791
WD40 repeat 273..297 CDD:293791
Wdr5bNP_001019937.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
WD40 31..325 CDD:238121
WD40 <34..325 CDD:225201
WD 1 37..76
WD40 repeat 42..79 CDD:293791
WD 2 79..120
WD40 repeat 85..121 CDD:293791
WD 3 122..162
WD40 repeat 126..162 CDD:293791
WD 4 163..202
WD40 repeat 169..204 CDD:293791
DDB1-binding motif 186..190
WD 5 206..247
WD40 repeat 211..247 CDD:293791
WD 6 250..290
WD40 repeat 255..292 CDD:293791
WD 7 293..328
WD40 repeat 298..324 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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