DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poc1 and Nle1

DIOPT Version :9

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_663406.2 Gene:Nle1 / 217011 MGIID:2429770 Length:485 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 10..298 CDD:238121
WD40 14..388 CDD:225201
WD40 repeat 22..58 CDD:293791
WD40 repeat 63..99 CDD:293791
WD40 repeat 106..140 CDD:293791
WD40 repeat 147..183 CDD:293791
WD40 repeat 189..224 CDD:293791
WD40 repeat 231..254 CDD:293791
WD40 repeat 273..297 CDD:293791
Nle1NP_663406.2 NLE 17..77 CDD:285380
WD40 106..484 CDD:238121
WD40 107..485 CDD:225201
WD 1 112..151
WD 2 154..193
WD40 repeat 159..197 CDD:293791
WD 3 197..241
WD40 repeat 203..244 CDD:293791
WD 4 244..282
WD40 repeat 249..284 CDD:293791
WD40 repeat 291..369 CDD:293791
WD 5 327..366
WD 6 370..409
WD40 repeat 375..411 CDD:293791
WD 7 412..451
WD40 repeat 417..453 CDD:293791
WD 8 454..484
WD40 repeat 459..483 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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