DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Poc1 and Wdr5

DIOPT Version :10

Sequence 1:NP_001261799.1 Gene:Poc1 / 39502 FlyBaseID:FBgn0036354 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_543124.1 Gene:Wdr5 / 140858 MGIID:2155884 Length:334 Species:Mus musculus


Alignment Length:302 Identity:82/302 - (27%)
Similarity:153/302 - (50%) Gaps:14/302 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
            ||:....||:..::.::|.|:|..:|:||.|..:.:|...........:.|...::.||||...|
Mouse    36 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100

  Fly    74 LVASAGHDRTVKIWEPK----LRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
            |:.||..|:|:|||:..    |:.:.|    ||..|...:|:...:|:::.|.|:|.:||.|...
Mouse   101 LLVSASDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161

  Fly   135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQ-LAWHPWG 198
            :.:.:....::.|.:..|:.:|.|:.::|.|...||:|..||:|::|..::...|.. :.:.|.|
Mouse   162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226

  Fly   199 NMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPS---GHFLLSGSDDRTIRILDLLEG 260
            ..:..|...|.:|::|.|..:.|:.|..|......:..:.|   |.:::|||:|..:.|.:|...
Mouse   227 KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291

  Fly   261 RPIYTLTGHTDAVNAVAFSRDGDKFATGG--SDRQLLVWQSN 300
            ..:..|.||||.|.:.|.....:..|:..  :|:.:.:|:|:
Mouse   292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Poc1NP_001261799.1 WD40 <7..298 CDD:441893 80/298 (27%)
WD40 repeat 22..58 CDD:293791 8/35 (23%)
WD40 repeat 63..99 CDD:293791 15/39 (38%)
WD40 repeat 106..140 CDD:293791 8/33 (24%)
WD40 repeat 147..183 CDD:293791 13/35 (37%)
WD40 repeat 189..224 CDD:293791 9/35 (26%)
WD40 repeat 231..254 CDD:293791 6/25 (24%)
WD40 repeat 273..297 CDD:293791 4/25 (16%)
Wdr5NP_543124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
WD40 <36..330 CDD:441893 80/297 (27%)
WD 1 43..82 10/38 (26%)
WD40 repeat 48..85 CDD:293791 8/36 (22%)
WD 2 85..126 15/40 (38%)
WD40 repeat 91..127 CDD:293791 14/35 (40%)
WD 3 128..168 11/39 (28%)
WD40 repeat 132..168 CDD:293791 9/35 (26%)
WD 4 169..208 12/38 (32%)
WD40 repeat 175..210 CDD:293791 12/34 (35%)
WD 5 212..253 9/40 (23%)
WD40 repeat 217..253 CDD:293791 8/35 (23%)
WD 6 256..296 8/39 (21%)
WD40 repeat 261..298 CDD:293791 8/36 (22%)
WD 7 299..333 9/33 (27%)
WD40 repeat 304..330 CDD:293791 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.