Protein Alignment Poc1 and wds

DIOPT Version :10

• Sequence 1: NP_001261799.1
• Gene: Poc1 / 39502
• FlyBaseID: FBgn0036354
• Length: 403
• Species: Drosophila melanogaster
• Sequence 2: XP_061501082.1
• Gene: wds / 1281099
• VectorBaseID: AGAMI1_005035
• Length: 375
• Species: Anopheles gambiae
• Alignment Length: 298
• Identity: 78/298 - (26%)
• Similarity: 139/298 - (46%)
• Gaps: 44/298 - (14%)

  Fly     7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWSP 70
            |...|:..:||..||:.:.:..|...:.|:|.|.|:.:|.|: :.:|:: ...|:..|....::|
Mosquito   117 DGKFEKTISGHKLGISDVAWSSDSRLLVTASDDKTLKIWELS-SGKCLKTLKGHTNYVFCCNFNP 180

  Fly    71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQ 135
            :.||:.|...|.:|:||:.:.........|||..|.:|.|:..|.|::::|.|...:||..|..|
Mosquito   181 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 245

  Fly   136 FVSSFAQQNN-WVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGN 199
            .:.:....:| .|...|||||||.:..|:.|.:::::|...|:|::|:|..|..
Mosquito   246 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHRNE----------- 299

  Fly   200 MLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIY 264
              ...:..|    |.|:|                      |.:::|||:|..:.|.:|.....:.
Mosquito   300 --KYCIFAN----FSVTG----------------------GKWIVSGSEDHMVYIWNLQSKEIVQ 336

  Fly   265 TLTGHTDAVNAVAFSRDGDKFATGG--SDRQLLVWQSN 300
            ||.||||.|...|.....:..|:..  :|:.:.:|:|:
Mosquito   337 TLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSD 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poc1	NP_001261799.1	WD40	<7..298	CDD:441893	76/294 (26%)
		WD40 repeat	22..58	CDD:293791	8/36 (22%)
		WD40 repeat	63..99	CDD:293791	9/35 (26%)
		WD40 repeat	106..140	CDD:293791	10/33 (30%)
		WD40 repeat	147..183	CDD:293791	14/35 (40%)
		WD40 repeat	189..224	CDD:293791	4/34 (12%)
		WD40 repeat	231..254	CDD:293791	5/22 (23%)
		WD40 repeat	273..297	CDD:293791	4/25 (16%)
wds	XP_061501082.1	None